Re: htscodec has new upstream location

2021-05-25 Thread Steffen Möller
Am 25.05.21 um 15:17 schrieb John Marshall: > Steffen Möller wrote: >> htscodecs is now distributed next to samtools > [...] >> I needed this update to compile 1.12 of htslib. which again is required >> to compile bcftools 1.12. > If you are making htslib depend on your libhtscodecs package then

Re: htscodec has new upstream location

2021-05-25 Thread Steffen Möller
Hi John, Am 25.05.21 um 15:17 schrieb John Marshall: > Steffen Möller wrote: >> htscodecs is now distributed next to samtools > [...] >> I needed this update to compile 1.12 of htslib. which again is required >> to compile bcftools 1.12. > If you are making htslib depend on your libhtscodecs packa

Re: htscodec has new upstream location

2021-05-25 Thread John Marshall
Steffen Möller wrote: > htscodecs is now distributed next to samtools [...] > > I needed this update to compile 1.12 of htslib. which again is required > to compile bcftools 1.12. If you are making htslib depend on your libhtscodecs package then you need to configure htslib to use it via --with-

Re: htscodec has new upstream location

2021-05-24 Thread Nilesh Patra
[I'm taking the liberty to answer your other questions] On 5/25/21 2:44 AM, Steffen Möller wrote: > How far away is our release, still? We don't know yet. The RC bugs in key packages[1] are 45, and this number seems to stay more-or-less, the same - I check this page daily and I do not blame any

htscodec has new upstream location

2021-05-24 Thread Steffen Möller
Hello, htscodecs is now distributed next to samtools, and with the new location come quite a few new versions. It is now at 1.0. It compiles for me, but @Michael, please kindly confirm that I have not messed this up. I needed this update to compile 1.12 of htslib. which again is required to compi