Dear SPAdes developer team, while updating the Debian packaging for SPAdes, which also includes adding build-time and installed tests for each tool, I noticed that the plasmidSPAdes tests (plasmidspades.test —test) do not succeed. This consistently happened for the Linux version (tested on Debian stretch) and on Mac OS X (version 10.11.5). I have attached the log file for one of them to this email.
The resulting error is: == Error == TEST FAILED: /home/vagrant/SPAdes-3.8.0-Linux/spades_test/contigs.fasta does not contain contigs! and indeed the file has size zero. I have skipped tests for plasmidSPAdes for now but wanted to let you know about the issue. Many thanks and best regards Sascha
spades.log
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