Dear Adly,
On Mon, Mar 11, 2019 at 02:14:51PM +, Adly Abdalla wrote:
> Dear Andreas and TonyThank you very much for your kind help, Now Abyss is
> cowing well with multiple threads. I have tested it with np=16 and the run
> was successfully. Best regardsAdly
Thanks a lot for confirming and
On 27/02/2019 08:30, Andreas Tille wrote:
[...]
(make sure you wait until abyss_2.1.5-7~bpo9+1 is available there - the
page is not yet updated at the time of writing!) and installing manually
on an Ubuntu system might work (but its not tested since I have no
easy access to an Ubuntu machine).
Hi again,
I just uploaded a fixed abyss to stretch backports:
abyss_2.1.5-7~bpo9+1_amd64.changes ACCEPTED into stretch-backports
So I guess the issue is fixed in Debian. I have no idea what might be
the most straightforward way to install it on Ubuntu - may be
downloading from
On Thu, Feb 14, 2019 at 09:54:58PM +, Tony Travis wrote:
>
> > https://wiki.ubuntu.com/SyncRequestProcess
>
> I'm already doing that :-)
Good. :-) I'd recommend not to request sync before #922351 is fixed.
Kind regards and thanks for pointing to this issue
Andreas.
--
On 14/02/2019 21:34, Andreas Tille wrote:
Just a short note: I installed the latest abyss and I get:
$ cat /usr/lib/abyss/ABYSS-P
#!/bin/bash
echo >&2 "error: ABySS was not configured with support for MPI. For details"
echo >&2 " on compiling ABySS with MPI suppor see:"
echo >&2 "
Just a short note: I installed the latest abyss and I get:
$ cat /usr/lib/abyss/ABYSS-P
#!/bin/bash
echo >&2 "error: ABySS was not configured with support for MPI. For details"
echo >&2 " on compiling ABySS with MPI suppor see:"
echo >&2 "
Hi Tony,
On Thu, Feb 14, 2019 at 07:27:16PM +, Tony Travis wrote:
> On 14/02/2019 17:14, Andreas Tille wrote:
> > I have no idea about the Ubuntu version but the stretch version is
> > 2.0.2-2 which sounds pretty close. My guess is that the build system
> > has some tweaks we missed to call
On 14/02/2019 17:14, Andreas Tille wrote:
Hi Tony,
On Thu, Feb 14, 2019 at 01:02:07PM +, Tony Travis wrote:
It looks like "ABYSS-P" is missing from the "abyss" package:
root@beluga:~# apt policy abyss
abyss:
Installed: 2.0.2-3
Candidate: 2.0.2-3
Version table:
*** 2.0.2-3 500
The first one
should be fixable if we check the build system of abyss - if nothing
helps with the help if upstream.
Thanks as well to Adly Abdalla for the initial report. We really
need to relay on user response since obviously nobody else did notice
this before.
Kind regards
And
Hi,
It looks like "ABYSS-P" is missing from the "abyss" package:
root@beluga:~# apt policy abyss
abyss:
Installed: 2.0.2-3
Candidate: 2.0.2-3
Version table:
*** 2.0.2-3 500
500 http://gb.archive.ubuntu.com/ubuntu bionic/multiverse amd64 Packages
100 /var/lib/dpkg/status
10 matches
Mail list logo
