[med-svn] [SCM] BEDtools annotated tag, precise-ppa/2.17.0-1_precise1, created. precise-ppa/2.17.0-1_precise1

2012-11-05 Thread Carlos Borroto
The annotated tag, precise-ppa/2.17.0-1_precise1 has been created at 81aeb70f6088a17b3eba62e1fb913421ad47b161 (tag) tagging 4c1886296a0a4835bcb4c41f6780a45c8533518d (commit) replaces debian/2.17.0-1 tagged by Carlos Borroto on Mon Nov 5 21:07:41 2012 -0500 - Shortlog ---

[med-svn] [SCM] BEDtools branch, precise-ppa, created. debian/2.17.0-1-1-g4c18862

2012-11-05 Thread Carlos Borroto
The branch, precise-ppa has been created at 4c1886296a0a4835bcb4c41f6780a45c8533518d (commit) - Shortlog commit 4c1886296a0a4835bcb4c41f6780a45c8533518d Author: Carlos Borroto Date: Mon Nov 5 21:04:08 2012 -0500 Uploaded

[med-svn] [SCM] tophat annotated tag, precise-ppa/2.0.6-1_precise1, created. precise-ppa/2.0.6-1_precise1

2012-11-05 Thread Carlos Borroto
The annotated tag, precise-ppa/2.0.6-1_precise1 has been created at 7c4561ad8c834029d52ba285f248d066a1802d30 (tag) tagging 15edb7b24394f67799576be3fdd61e0d7f30b6ff (commit) replaces precise-ppa/2.0.4-1_precise1 tagged by Carlos Borroto on Mon Nov 5 19:05:17 2012 -0500 -

[med-svn] [SCM] tophat branch, precise-ppa, updated. precise-ppa/2.0.4-1_precise1-9-g15edb7b

2012-11-05 Thread Carlos Borroto
The following commit has been merged in the precise-ppa branch: commit b2c4ba5334695d89abeccfc9dd65390165ca6592 Merge: 41a61988905b95ae7ae4c907e5865e46f7c84755 028c6036b3393bbcd504be21dfafc8be78cf3b92 Author: Carlos Borroto Date: Mon Nov 5 18:40:10 2012 -0500 Merge branch 'master' into pre

[med-svn] [SCM] tophat branch, precise-ppa, updated. precise-ppa/2.0.4-1_precise1-9-g15edb7b

2012-11-05 Thread Carlos Borroto
The following commit has been merged in the precise-ppa branch: commit 15edb7b24394f67799576be3fdd61e0d7f30b6ff Author: Carlos Borroto Date: Mon Nov 5 18:47:44 2012 -0500 Uploaded tophat_2.0.6-1~precise1_source.changes to Debian Med's PPA diff --git a/debian/changelog b/debian/changelog in

[med-svn] [SCM] bowtie2 annotated tag, precise-ppa/2.0.2-1_precise1, created. precise-ppa/2.0.2-1_precise1

2012-11-05 Thread Carlos Borroto
The annotated tag, precise-ppa/2.0.2-1_precise1 has been created at 377189ad95a9d05f76e29d932affa7aa9a19af57 (tag) tagging 0ed11a2b60032b5bd122e14a26b11bcb626b00ae (commit) replaces upstream/2.0.2 tagged by Carlos Borroto on Mon Nov 5 18:33:26 2012 -0500 - Shortlog -

[med-svn] [SCM] bowtie2 branch, precise-ppa, created. upstream/2.0.2-44-g0ed11a2

2012-11-05 Thread Carlos Borroto
The branch, precise-ppa has been created at 0ed11a2b60032b5bd122e14a26b11bcb626b00ae (commit) - Shortlog commit 0ed11a2b60032b5bd122e14a26b11bcb626b00ae Author: Carlos Borroto Date: Mon Nov 5 18:26:43 2012 -0500 Uploaded

[med-svn] [SCM] ray branch, master, updated. 446f11f7b4522f7c4664e5ac8eb0e4c9d87f55a3

2012-11-05 Thread Sébastien Boisvert
The following commit has been merged in the master branch: commit 446f11f7b4522f7c4664e5ac8eb0e4c9d87f55a3 Author: Sébastien Boisvert Date: Mon Nov 5 18:55:08 2012 -0500 ray-doc and ray-extra must use the 'all' arch Signed-off-by: Sébastien Boisvert diff --git a/debian/control b/

[med-svn] [SCM] bowtie2 branch, master, updated. upstream/2.0.2-43-g7a11999

2012-11-05 Thread Carlos Borroto
The following commit has been merged in the master branch: commit 7a11999129e6c956f13d4498d8df3268aa1cf24e Author: Carlos Borroto Date: Mon Nov 5 18:15:57 2012 -0500 small typo fix in debian/changelog diff --git a/debian/changelog b/debian/changelog index e87705f..f0cf7f2 100644 --- a/debi

[med-svn] [SCM] python-csb branch, master, updated. b81101486eeca4d1c4d9f32baeeb6b7fc5312b62

2012-11-05 Thread Tomas Di Domenico
The following commit has been merged in the master branch: commit b81101486eeca4d1c4d9f32baeeb6b7fc5312b62 Author: Tomas Di Domenico Date: Mon Nov 5 21:52:58 2012 +0100 Changed debian/watch to point to the project's tarball in pypi diff --git a/debian/watch b/debian/watch index 61716cd..ed

[med-svn] [SCM] bowtie2 branch, master, updated. upstream/2.0.2-42-g6cf23d3

2012-11-05 Thread Alexandre Mestiashvili
The following commit has been merged in the master branch: commit 96e892657619ade73c8ab21d9b496ca7cd791bff Author: Alexandre Mestiashvili Date: Mon Nov 5 10:46:10 2012 +0100 added autopkgtest framework support added a simple bowtie2 test diff --git a/debian/control b/debian/control ind

[med-svn] [SCM] bowtie2 branch, master, updated. upstream/2.0.2-42-g6cf23d3

2012-11-05 Thread Alexandre Mestiashvili
The following commit has been merged in the master branch: commit 6cf23d3a8929c12873beddeda641f6aae59c4251 Author: Alexandre Mestiashvili Date: Mon Nov 5 11:15:58 2012 +0100 updated changelog to reflect cahnages for 2.0.0-beta7-1 diff --git a/debian/changelog b/debian/changelog index 726ca