[med-svn] [libcofoja-java] branch master updated (36490da -> 8ba8eac)

2014-03-10 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libcofoja-java. from 36490da Add some Build-Depends new 8ba8eac Use Debian packaged JARs The 1 revisions listed above as "new" are entirely new to this repos

[med-svn] [libcofoja-java] 01/01: Use Debian packaged JARs

2014-03-10 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libcofoja-java. commit 8ba8eaceea0fe292d21bc9f86ad3bbceb167883a Author: Andreas Tille Date: Sun Mar 9 21:45:15 2014 +0100 Use Debian packaged JARs --- debian/patches/se

[med-svn] [libcofoja-java] branch master updated (8ba8eac -> 7045f1d)

2014-03-10 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libcofoja-java. from 8ba8eac Use Debian packaged JARs new 7045f1d Make sure we use asm4 The 1 revisions listed above as "new" are entirely new to this reposi

[med-svn] [libcofoja-java] branch master updated (7045f1d -> 1cb9874)

2014-03-10 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libcofoja-java. from 7045f1d Make sure we use asm4 new 1cb9874 Use correct location for jlibs, doc is not built The 1 revisions listed above as "new" are ent

[med-svn] [libcofoja-java] 01/01: Use correct location for jlibs, doc is not built

2014-03-10 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libcofoja-java. commit 1cb98742f6916cff200e057038c999d28aa8dfdc Author: Andreas Tille Date: Sun Mar 9 23:05:06 2014 +0100 Use correct location for jlibs, doc is not buil

[med-svn] [libcofoja-java] 01/01: Make sure we use asm4

2014-03-10 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libcofoja-java. commit 7045f1dc6adbf088b8e9ada226efd8f214c690e0 Author: Andreas Tille Date: Sun Mar 9 22:19:07 2014 +0100 Make sure we use asm4 --- debian/control

[med-svn] r16403 - trunk/packages/dicom3tools/trunk/debian

2014-03-10 Thread Mathieu Malaterre
Author: malat Date: 2014-03-10 10:21:51 + (Mon, 10 Mar 2014) New Revision: 16403 Modified: trunk/packages/dicom3tools/trunk/debian/changelog Log: new upstream Modified: trunk/packages/dicom3tools/trunk/debian/changelog === --

[med-svn] r16404 - in trunk/packages/elastix/trunk/debian: . patches

2014-03-10 Thread Gert Wollny
Author: gert-guest Date: 2014-03-10 10:33:16 + (Mon, 10 Mar 2014) New Revision: 16404 Modified: trunk/packages/elastix/trunk/debian/changelog trunk/packages/elastix/trunk/debian/control trunk/packages/elastix/trunk/debian/patches/series trunk/packages/elastix/trunk/debian/rules Log

[med-svn] r16405 - trunk/packages/dssp/trunk/debian

2014-03-10 Thread Andreas Tille
Author: tille Date: 2014-03-10 10:37:01 + (Mon, 10 Mar 2014) New Revision: 16405 Modified: trunk/packages/dssp/trunk/debian/changelog Log: Add symlink dssp as executable since BioPython is relying on the old name Modified: trunk/packages/dssp/trunk/debian/changelog ===

[med-svn] r16406 - trunk/packages/elastix/trunk/debian/patches

2014-03-10 Thread Gert Wollny
Author: gert-guest Date: 2014-03-10 10:38:12 + (Mon, 10 Mar 2014) New Revision: 16406 Removed: trunk/packages/elastix/trunk/debian/patches/disable-mevisdicomtiff.patch trunk/packages/elastix/trunk/debian/patches/itk-review-detection.patch Log: actually delete the old patches from svn De

[med-svn] r16407 - trunk/packages/dssp/trunk/debian

2014-03-10 Thread Andreas Tille
Author: tille Date: 2014-03-10 10:41:20 + (Mon, 10 Mar 2014) New Revision: 16407 Removed: trunk/packages/dssp/trunk/debian/README.source Modified: trunk/packages/dssp/trunk/debian/changelog trunk/packages/dssp/trunk/debian/compat trunk/packages/dssp/trunk/debian/control Log: Lucid

[med-svn] r16408 - in trunk/packages/dicom3tools/tags: . 1.00~20140306-1/debian

2014-03-10 Thread Mathieu Malaterre
Author: malat Date: 2014-03-10 10:54:32 + (Mon, 10 Mar 2014) New Revision: 16408 Added: trunk/packages/dicom3tools/tags/1.00~20140306-1/ trunk/packages/dicom3tools/tags/1.00~20140306-1/debian/changelog Removed: trunk/packages/dicom3tools/tags/1.00~20140306-1/debian/changelog Log: [svn

[med-svn] r16409 - trunk/packages/dssp/trunk/debian

2014-03-10 Thread Andreas Tille
Author: tille Date: 2014-03-10 10:55:50 + (Mon, 10 Mar 2014) New Revision: 16409 Modified: trunk/packages/dssp/trunk/debian/changelog trunk/packages/dssp/trunk/debian/control Log: cme fix dpkg-control Modified: trunk/packages/dssp/trunk/debian/changelog

[med-svn] r16410 - trunk/packages/parsinsert/trunk/debian

2014-03-10 Thread Thorsten Alteholz
Author: alteholz Date: 2014-03-10 13:18:28 + (Mon, 10 Mar 2014) New Revision: 16410 Modified: trunk/packages/parsinsert/trunk/debian/copyright Log: it should be ...+ Modified: trunk/packages/parsinsert/trunk/debian/copyright =

[med-svn] r16411 - trunk/packages/dssp/trunk/debian

2014-03-10 Thread Andreas Tille
Author: tille Date: 2014-03-10 13:33:08 + (Mon, 10 Mar 2014) New Revision: 16411 Modified: trunk/packages/dssp/trunk/debian/changelog Log: Upload to unstable Modified: trunk/packages/dssp/trunk/debian/changelog === --- trunk/

[med-svn] r16412 - trunk/packages/dssp/tags

2014-03-10 Thread Andreas Tille
Author: tille Date: 2014-03-10 13:33:48 + (Mon, 10 Mar 2014) New Revision: 16412 Added: trunk/packages/dssp/tags/2.2.1-2/ Log: Tagged 2.2.1-2 ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debia

[med-svn] r16413 - in trunk/packages/qiime/trunk/debian: . patches scripts scripts/shell

2014-03-10 Thread Timothy Booth
Author: tbooth-guest Date: 2014-03-10 14:53:55 + (Mon, 10 Mar 2014) New Revision: 16413 Added: trunk/packages/qiime/trunk/debian/patches/detect_matplotlib_version trunk/packages/qiime/trunk/debian/patches/fix_script_usage_tests trunk/packages/qiime/trunk/debian/patches/prevent_downloa

[med-svn] r16414 - trunk/packages/python-biopython/trunk/debian

2014-03-10 Thread Philipp Benner
Author: philipp Date: 2014-03-10 16:44:10 + (Mon, 10 Mar 2014) New Revision: 16414 Modified: trunk/packages/python-biopython/trunk/debian/changelog Log: merged old changelog from version 1.63-1 Modified: trunk/packages/python-biopython/trunk/debian/changelog ===

[med-svn] r16415 - trunk/packages/rostlab/predictprotein/trunk/debian

2014-03-10 Thread Guy Yachdav
Author: gyachdav-guest Date: 2014-03-10 20:02:23 + (Mon, 10 Mar 2014) New Revision: 16415 Modified: trunk/packages/rostlab/predictprotein/trunk/debian/changelog Log: New upstream release: integrated TMSEG(1) not yet in Deb Modified: trunk/packages/rostlab/predictprotein/trunk/debian/change

[med-svn] r16416 - trunk/packages/rostlab/predictprotein/trunk/debian

2014-03-10 Thread Guy Yachdav
Author: gyachdav-guest Date: 2014-03-10 20:12:54 + (Mon, 10 Mar 2014) New Revision: 16416 Modified: trunk/packages/rostlab/predictprotein/trunk/debian/changelog Log: New upstream release Modified: trunk/packages/rostlab/predictprotein/trunk/debian/changelog

[med-svn] r16417 - trunk/packages/python-biopython/trunk/debian

2014-03-10 Thread Philipp Benner
Author: philipp Date: 2014-03-10 20:56:38 + (Mon, 10 Mar 2014) New Revision: 16417 Modified: trunk/packages/python-biopython/trunk/debian/README.source trunk/packages/python-biopython/trunk/debian/control Log: removed bwa from build-dependencies Modified: trunk/packages/python-biopython