Author: tille
Date: 2015-02-02 06:56:55 + (Mon, 02 Feb 2015)
New Revision: 18724
Added:
trunk/packages/vsearch/trunk/debian/patches/fix_optimisation_flags.patch
Modified:
trunk/packages/vsearch/trunk/debian/changelog
trunk/packages/vsearch/trunk/debian/patches/series
Log:
Do not use -
Author: tille
Date: 2015-02-02 06:41:04 + (Mon, 02 Feb 2015)
New Revision: 18723
Modified:
trunk/packages/vsearch/trunk/debian/changelog
Log:
There is a new upstream version of vsearch
Modified: trunk/packages/vsearch/trunk/debian/changelog
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commit 0b7aa4bee5be3d37ab005284c3f5572336fbc89a
Author: Andreas Tille
Date: Sun Feb 1 21:42:31 2015 +0100
Imported Upstream version 2.5+dfsg
---
doc/_bui
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commit 4bbf6ca2f666507c59d4535ecf321b7204d34440
Merge: 5677463 0b7aa4b
Author: Andreas Tille
Date: Sun Feb 1 21:42:57 2015 +0100
Merge tag 'upstream/2.5+d
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Th
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pristine-tar data for python-ruffus_2.5+df
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Author: Andreas Tille
Date: Sun Feb 1 21:41:48 2015 +0100
Getting rid of some compressed JS files which ar
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commit c1737c1430751c665375b525e96c7f2ee9ea3ed5
Author: Andreas Tille
Date: Sun Feb 1 21:15:13 2015 +0100
Use python-all instead of python-all-dev
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de
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commit 426c2c9a0f8ce456e3ce36abf81287915e2b9ad0
Author: Andreas Tille
Date: Sun Feb 1 20:42:43 2015 +0100
use libjs-mathjax
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debian/control | 3 ++-
d
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commit e3a497943d1a27afc4d0383ee66e7edfd078a19c
Author: Tim Booth
Date: Sun Feb 1 18:56:01 2015 +
not a native package
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debian/changelog | 2 +-
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commit 14872051eb7db5d918da40b82b31197d59e590ca
Author: Tim Booth
Date: Sun Feb 1 19:10:01 2015 +
Add a manpage for our little wrapper script
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d
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commit ce5f9e7dd2ef1b9a6229046d6d8ee26fa56ed982
Author: Michael R. Crusoe
Date: Sun Feb 1 13:43:10 2015 -0500
more Jellyfish path fixes
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commit c84735e81d924f6931fb367316e042f62f94c031
Author: Michael R. Crusoe
Date: Sun Feb 1 14:00:45 2015 -0500
include postinstall tests
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Author: Michael R. Crusoe
Date: Sun Feb 1 13:59:53 2015 -0500
include Analysis directory
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commit 3c17c9180ceebcec4235f9ce9fb426080da5193f
Author: Tim Booth
Date: Sun Feb 1 18:53:41 2015 +
initial debianization
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debian/bin/jaligner |
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pristine-tar data for jaligner_1.0.orig.tar.
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The
Author: moeller
Date: 2015-02-01 18:49:33 + (Sun, 01 Feb 2015)
New Revision: 18722
Modified:
trunk/community/edam/registry-tool.py
Log:
EDAM: Added placeholder uri->term routine
Modified: trunk/community/edam/registry-tool.py
===
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new 0d3a568 parrall attempt
new 16004ae remove u
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commit 16004aec3fcba65b51050fe4e1708ae93a4a9780
Author: Michael R. Crusoe
Date: Sun Feb 1 13:34:11 2015 -0500
remove unused createmanpages script
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commit 0d3a568eee1c86fc5c547bd6a501f6decb8c84df
Author: Michael R. Crusoe
Date: Sat Jan 31 17:23:29 2015 -0500
parrall attempt
---
debian/rules | 2 +-
1
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commit f4711047996544131f9ec269cdddabdabce5
Author: Michael R. Crusoe
Date: Sun Feb 1 12:04:26 2015 -0500
Butterfly
---
debian/copyright
Author: moeller
Date: 2015-02-01 18:03:45 + (Sun, 01 Feb 2015)
New Revision: 18721
Removed:
trunk/community/edam/debian2edam
Log:
debian2edam is superseeded by what is currently named registry-tool.py
Deleted: trunk/community/edam/debian2edam
===
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commit 8332cc12badc3a69eb066557434036aeadc2012e
Author: Michael R. Crusoe
Date: Sun Feb 1 08:03:24 2015 -0500
follow original layout
---
debian/r
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commit f8698bf1e420c4673e9740f07efa7b37ecd5c718
Author: Michael R. Crusoe
Date: Sun Feb 1 04:37:52 2015 -0500
use system jellyfish binary
---
deb
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from 9062526 update VCS
new f8698bf use system jellyfish binary
new 8332cc1 follow original layout
new 4f7469d buil
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commit 4f7469d1ec99456f64d05340d3201e3be637b798
Author: Michael R. Crusoe
Date: Sun Feb 1 10:23:43 2015 -0500
build Butterfly
---
debian/control
Author: bneron-guest
Date: 2015-02-01 15:50:38 + (Sun, 01 Feb 2015)
New Revision: 18720
Added:
trunk/packages/macsyfinder/trunk/debian/
trunk/packages/macsyfinder/trunk/debian/changelog
trunk/packages/macsyfinder/trunk/debian/compat
trunk/packages/macsyfinder/trunk/debian/control
Author: bneron-guest
Date: 2015-02-01 15:50:22 + (Sun, 01 Feb 2015)
New Revision: 18718
Added:
trunk/packages/macsyfinder/
trunk/packages/macsyfinder/tags/
Log:
[svn-inject] Creating macsyfinder/tags/ directory.
___
debian-med-commit mailing
Author: bneron-guest
Date: 2015-02-01 15:50:32 + (Sun, 01 Feb 2015)
New Revision: 18719
Added:
trunk/packages/macsyfinder/trunk/
Log:
Creating trunk directory
___
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debian-med-commit@lists.alioth.debian.org
http://li
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commit c9d69bc7f938fc3ca813898fa4a54636c9f8265c
Author: Andreas Tille
Date: Sun Feb 1 16:34:41 2015 +0100
Generate doc package
---
debian/control | 24 ++
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from 4b14e41 Create python3 package as well
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The 1 revisions listed above as "new" are entirely new to this
re
Author: tille
Date: 2015-02-01 15:16:11 + (Sun, 01 Feb 2015)
New Revision: 18717
Modified:
trunk/packages/vsearch/trunk/debian/README.source
trunk/packages/vsearch/trunk/debian/changelog
Log:
Add proper information for data files
Modified: trunk/packages/vsearch/trunk/debian/README.sou
Author: tille
Date: 2015-02-01 15:14:30 + (Sun, 01 Feb 2015)
New Revision: 18716
Added:
trunk/packages/vsearch/tags/1.0.7+dfsg-1/
Removed:
trunk/packages/vsearch/tags/1.0.7+dfsg-1/
Log:
Properly tag what was uploaded
___
debian-med-commit ma
Author: tille
Date: 2015-02-01 15:12:52 + (Sun, 01 Feb 2015)
New Revision: 18715
Added:
trunk/packages/vsearch/trunk/debian/README.test
Modified:
trunk/packages/vsearch/trunk/debian/README.source
trunk/packages/vsearch/trunk/debian/changelog
trunk/packages/vsearch/trunk/debian/cont
Author: sascha-guest
Date: 2015-02-01 15:07:53 + (Sun, 01 Feb 2015)
New Revision: 18714
Modified:
trunk/packages/aragorn/trunk/debian/upstream/edam
Log:
indentation
Modified: trunk/packages/aragorn/trunk/debian/upstream/edam
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commit 4b14e41580d19a92b5dd6515f283a4719733723d
Author: Andreas Tille
Date: Sun Feb 1 15:56:30 2015 +0100
Create python3 package as well
---
debian/contr
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from edb66c5 Proper copyright information
new 2dc27fa Get some kind of package
new 4b14e41 Create python3 package as well
The 2 revi
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commit 2dc27fafd2445535a679c0ad37983be58f7d1fb2
Author: Andreas Tille
Date: Sun Feb 1 15:41:31 2015 +0100
Get some kind of package
---
debian/control | 1
Author: moeller
Date: 2015-02-01 14:54:14 + (Sun, 01 Feb 2015)
New Revision: 18713
Modified:
trunk/packages/barrnap-data-nonfree/trunk/debian/
trunk/packages/barrnap-data-nonfree/trunk/debian/changelog
Log:
barnap-data-nonfree - first upload
Property changes on: trunk/packages/barrnap-
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commit edb66c5740f1a9340583642b542e43c5b0fcda59
Author: Andreas Tille
Date: Sun Feb 1 15:33:27 2015 +0100
Proper copyright information
---
debian/changel
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from 0bc90bc Citation data
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Author: moeller
Date: 2015-02-01 14:31:34 + (Sun, 01 Feb 2015)
New Revision: 18712
Removed:
trunk/packages/barrnap/trunk/debian/files
Modified:
trunk/packages/barrnap/trunk/debian/changelog
Log:
Preparing for the upload of barnap.
Modified: trunk/packages/barrnap/trunk/debian/changelog
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commit 0bc90bc46b8ed83b339b75d00da6b6b32a3529b3
Author: Andreas Tille
Date: Sun Feb 1 15:27:09 2015 +0100
Citation data
---
debian/upstream/metadata | 22
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commit ea395dffc16e705720dd23a0350e0506632b6e5c
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Date: Sun Feb 1 15:16:25 2015 +0100
pristine-tar data for python-ruffus_2.5.or
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commit f9ba7cd0fd159ef7fccd88501dabadce4f1f72d2
Author: Andreas Tille
Date: Sun Feb 1 15:19:16 2015 +0100
Add packaging skeleton
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Some skeleton for libtabixpp is now in Git
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Author: Andreas Tille
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Add some very raw packaging template far from being
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Date: Sun Feb 1 14:53:24 2015 +0100
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commit 7b266d6596d3b676cc656f4bd60efe39bef3
Author: Andreas Tille
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Needs https://github.com/ekg/tabixpp
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debian/cha
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commit f124b3a20556fb243b8c23170ec69b9634b4d526
Author: Andreas Tille
Date: Sun Feb 1 14:23:33 2015 +0100
Add lincense information
---
debian/copyright | 32
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commit 400dc7d3057889d2754e19a481b126bf6cd0ec28
Author: Andreas Tille
Date: Sun Feb 1 14:21:09 2015 +0100
Add http://www.ruffus.org.uk/ to todo list
---
debian/cha
Author: tbooth-guest
Date: 2015-02-01 13:09:28 + (Sun, 01 Feb 2015)
New Revision: 18711
Added:
trunk/packages/galaxy/trunk/debian/apache-proxy-files/etc/apache2/conf-available/
trunk/packages/galaxy/trunk/debian/apache-proxy-files/etc/apache2/conf-available/galaxy.conf
trunk/packag
Author: tbooth-guest
Date: 2015-02-01 13:04:21 + (Sun, 01 Feb 2015)
New Revision: 18710
Added:
trunk/packages/galaxy/trunk/debian/apache-proxy-files/usr/share/galaxy-server/static/
trunk/packages/galaxy/trunk/debian/apache-proxy-files/usr/share/galaxy-server/static/logout1.html
trun
Author: hmenager-guest
Date: 2015-02-01 13:03:34 + (Sun, 01 Feb 2015)
New Revision: 18709
Added:
trunk/community/edam/registry-tool.py
Modified:
trunk/community/edam/debian2edam
Log:
registry-tool.py, draft for a python based json generation.
Modified: trunk/community/edam/debian2edam
Author: hmenager-guest
Date: 2015-02-01 13:01:01 + (Sun, 01 Feb 2015)
New Revision: 18708
Modified:
trunk/community/edam/test/test_muscle/debian/upstream/edam
Log:
fix formats list in the muscle desc. sample
Modified: trunk/community/edam/test/test_muscle/debian/upstream/edam
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commit ae71e5c8ca2fe90a4074612938e72cf64a6bad0f
Author: Andreas Tille
Date: Sun Feb 1 12:02:42 2015 +0100
Add some description
---
debian/control
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Author: Andreas Tille
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Add comment that packaging of vcslib has started
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tille pushed a change to branch master
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from 5d04db5 Merge tag 'upstream/0.9.20'
new 50887db Add comment that packaging of vcslib has started
The 1 revisions listed above as "new" are en
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tille pushed a change to branch master
in repository libvcflib.
at c80f32c Raw packaging template
This branch includes the following new commits:
new 47d8807 Imported Upstream version 0.0.20141212
new
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tille pushed a change to annotated tag upstream/0.0.20141212
in repository libvcflib.
at 92ccdca (tag)
tagging 47d88078ab2af69a961d344ac607a4e05a790980 (commit)
tagged by Andreas Tille
on Sun Feb 1 11:54:
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tille pushed a change to branch pristine-tar
in repository libvcflib.
at 5fe699a pristine-tar data for libvcflib_0.0.20141212.orig.tar.xz
This branch includes the following new commits:
new 5fe699a pristine-
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tille pushed a commit to branch pristine-tar
in repository libvcflib.
commit 5fe699a7c1aba4f34e710ea00d1ab99979dacc3d
Author: Andreas Tille
Date: Sun Feb 1 11:54:34 2015 +0100
pristine-tar data for libvcflib_0.0.20141212.o
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tille pushed a commit to branch master
in repository libvcflib.
commit c80f32c87618b0e8daefeda8f740d82ef827d5e5
Author: Andreas Tille
Date: Sun Feb 1 11:54:46 2015 +0100
Raw packaging template
---
debian/changelog
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tille pushed a change to branch upstream
in repository libvcflib.
at 47d8807 Imported Upstream version 0.0.20141212
No new revisions were added by this update.
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/srv/gi
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tille pushed a change to branch debian
in repository sga.
from 359711f Merge branch 'debian' of
git+ssh://git.debian.org/git/debian-med/sga into debian
new 9878e7d cme fix dpkg-control
new ab8aa04 Wor
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tille pushed a commit to branch debian
in repository sga.
commit ab8aa045f60918e979b17f192565dc135811af0a
Author: Andreas Tille
Date: Sun Feb 1 11:30:58 2015 +0100
Work a bit into testing (far from finishing)
---
debian/c
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tille pushed a commit to branch debian
in repository sga.
commit 9878e7d79588fe302ff1c9cbca586f26737e06b6
Author: Andreas Tille
Date: Sat Jan 31 19:47:10 2015 +0100
cme fix dpkg-control
---
debian/control | 4 ++--
1 file
Author: osallou
Date: 2015-02-01 09:47:31 + (Sun, 01 Feb 2015)
New Revision: 18707
Modified:
trunk/packages/vienna-rna/trunk/debian/changelog
Log:
update changes
Modified: trunk/packages/vienna-rna/trunk/debian/changelog
===
-
Author: sascha-guest
Date: 2015-02-01 09:45:19 + (Sun, 01 Feb 2015)
New Revision: 18706
Modified:
trunk/packages/aragorn/trunk/debian/upstream/edam
Log:
fix YAML
Modified: trunk/packages/aragorn/trunk/debian/upstream/edam
===
Author: osallou
Date: 2015-02-01 09:44:37 + (Sun, 01 Feb 2015)
New Revision: 18705
Modified:
trunk/packages/vienna-rna/trunk/debian/rules
Log:
cleanup fixes for multiple rebuilds
Modified: trunk/packages/vienna-rna/trunk/debian/rules
Author: sascha-guest
Date: 2015-02-01 09:30:14 + (Sun, 01 Feb 2015)
New Revision: 18704
Added:
trunk/packages/aragorn/trunk/debian/upstream/edam
Log:
add EDAM YAML annotation for aragorn
Added: trunk/packages/aragorn/trunk/debian/upstream/edam
=
Author: sascha-guest
Date: 2015-02-01 09:29:44 + (Sun, 01 Feb 2015)
New Revision: 18703
Modified:
trunk/packages/aragorn/trunk/debian/upstream/metadata
Log:
remove stray period
Modified: trunk/packages/aragorn/trunk/debian/upstream/metadata
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misterc-guest pushed a change to branch upstream
in repository trinityrnaseq.
at f018d02 Imported Upstream version 2.0.2
No new revisions were added by this update.
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Author: sascha-guest
Date: 2015-02-01 09:11:34 + (Sun, 01 Feb 2015)
New Revision: 18702
Modified:
trunk/packages/barrnap-data-nonfree/trunk/debian/rules
Log:
remove dead code
Modified: trunk/packages/barrnap-data-nonfree/trunk/debian/rules
=
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