[med-svn] [Git][med-team/conda][master] 2 commits: Try hard to get the .version file created

2019-03-10 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / conda Commits: 972a7be1 by Andreas Tille at 2019-03-10T17:25:17Z Try hard to get the .version file created - - - - - bc9b9fd4 by Andreas Tille at 2019-03-10T17:38:42Z Add pytest build-depends - - - - - 4 changed files: - debian/control -

[med-svn] [Git][med-team/beast2-mcmc] Pushed new tag upstream/2.5.2+dfsg

2019-03-10 Thread Olivier Sallou
Olivier Sallou pushed new tag upstream/2.5.2+dfsg at Debian Med / beast2-mcmc -- View it on GitLab: https://salsa.debian.org/med-team/beast2-mcmc/tree/upstream/2.5.2+dfsg You're receiving this email because of your account on salsa.debian.org. ___ debi

[med-svn] [Git][med-team/beast2-mcmc][pristine-tar] pristine-tar data for beast2-mcmc_2.5.2+dfsg.orig.tar.xz

2019-03-10 Thread Olivier Sallou
Olivier Sallou pushed to branch pristine-tar at Debian Med / beast2-mcmc Commits: 17fc79fa by Olivier Sallou at 2019-03-10T16:22:55Z pristine-tar data for beast2-mcmc_2.5.2+dfsg.orig.tar.xz - - - - - 2 changed files: - + beast2-mcmc_2.5.2+dfsg.orig.tar.xz.delta - + beast2-mcmc_2.5.2+dfsg.orig

[med-svn] [Git][med-team/beast2-mcmc][master] 5 commits: New upstream version 2.5.2+dfsg

2019-03-10 Thread Olivier Sallou
Olivier Sallou pushed to branch master at Debian Med / beast2-mcmc Commits: 5d49e7d8 by Olivier Sallou at 2019-03-10T16:22:38Z New upstream version 2.5.2+dfsg - - - - - dcb45fc3 by Olivier Sallou at 2019-03-10T16:22:55Z Update upstream source from tag 'upstream/2.5.2+dfsg' Update to upstream ver

[med-svn] [Git][med-team/beast2-mcmc][upstream] New upstream version 2.5.2+dfsg

2019-03-10 Thread Olivier Sallou
Olivier Sallou pushed to branch upstream at Debian Med / beast2-mcmc Commits: 5d49e7d8 by Olivier Sallou at 2019-03-10T16:22:38Z New upstream version 2.5.2+dfsg - - - - - 30 changed files: - build.xml - doc/tutorials/DivergenceDating/DivergenceDatingTutorial.bib - doc/tutorials/EBSP/ebsp2-tut.

[med-svn] [Git][med-team/bismark][master] Add publication

2019-03-10 Thread Liubov Chuprikova
Liubov Chuprikova pushed to branch master at Debian Med / bismark Commits: d035b272 by Liubov Chuprikova at 2019-03-10T14:41:48Z Add publication - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata

[med-svn] [Git][med-team/bismark][master] Initial packaging

2019-03-10 Thread Liubov Chuprikova
Liubov Chuprikova pushed to branch master at Debian Med / bismark Commits: 016b49af by Liubov Chuprikova at 2019-03-10T14:27:45Z Initial packaging - - - - - 14 changed files: - + debian/README.test - + debian/changelog - + debian/compat - + debian/control - + debian/copyright - + debian/docs

[med-svn] [Git][med-team/python-pycosat][master] 3 commits: Add include path to picosat

2019-03-10 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / python-pycosat Commits: 7d427941 by Andreas Tille at 2019-03-10T14:16:53Z Add include path to picosat - - - - - 30c22471 by Andreas Tille at 2019-03-10T14:34:59Z Fix license - - - - - 0e52540d by Andreas Tille at 2019-03-10T14:35:09Z DEP3 -

[med-svn] [Git][med-team/inspect][master] Updated RRID in d/u/metadata

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / inspect Commits: c8e85a37 by Steffen Möller at 2019-03-10T13:45:37Z Updated RRID in d/u/metadata - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata ==

[med-svn] [Git][med-team/htseq][master] Updated bio.tools+SciCrunch refs

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / htseq Commits: f9d9e452 by Steffen Möller at 2019-03-10T13:40:12Z Updated bio.tools+SciCrunch refs - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata

[med-svn] [Git][med-team/mach-haplotyper][master] Updated RRIDs

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / mach-haplotyper Commits: bc99ac0d by Steffen Möller at 2019-03-10T13:37:21Z Updated RRIDs - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata =

[med-svn] [Git][med-team/hisat2][master] Updated RRID in d/u/metadata

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / hisat2 Commits: d721a700 by Steffen Möller at 2019-03-10T13:34:17Z Updated RRID in d/u/metadata - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata ===

[med-svn] [Git][med-team/bio-rainbow][master] Updated bio.tools ref

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / bio-rainbow Commits: 0e5ae4ac by Steffen Möller at 2019-03-10T13:32:19Z Updated bio.tools ref - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata =

[med-svn] [Git][med-team/sibelia][master] Updated RRID in metadata

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / sibelia Commits: d7f5e53d by Steffen Möller at 2019-03-10T13:31:32Z Updated RRID in metadata - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata ==

[med-svn] [Git][med-team/community/helper-scripts][master] Fix test whether project exists

2019-03-10 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / community / helper-scripts Commits: 8a4b2a23 by Andreas Tille at 2019-03-10T13:18:46Z Fix test whether project exists - - - - - 1 changed file: - inject-into-salsa-git Changes: = inject-into-salsa-git

[med-svn] [Git][med-team/mcl][master] Update metadata

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / mcl Commits: 23b75dcf by Steffen Möller at 2019-03-10T13:14:23Z Update metadata - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata ===

[med-svn] [Git][med-team/cnvkit][master] Updated bio.tools+SciCrunch ref

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / cnvkit Commits: 7ab5ac86 by Steffen Möller at 2019-03-10T13:10:24Z Updated bio.tools+SciCrunch ref - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata

[med-svn] [Git][med-team/t-coffee][master] Updated bio.tools ref

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / t-coffee Commits: 6cbf3c08 by Steffen Möller at 2019-03-10T12:57:56Z Updated bio.tools ref - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata

[med-svn] [Git][med-team/crux][master] Updated bio.tools ref in metadata

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / crux Commits: 2fde56a9 by Steffen Möller at 2019-03-10T12:57:00Z Updated bio.tools ref in metadata - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata

[med-svn] [Git][med-team/sigma-align][master] Updated bio.tools

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / sigma-align Commits: bc52d522 by Steffen Möller at 2019-03-10T12:53:18Z Updated bio.tools - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata =

[med-svn] [Git][med-team/cnvkit][master] Updated bio.tools ref

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / cnvkit Commits: 67df5709 by Steffen Möller at 2019-03-10T12:53:58Z Updated bio.tools ref - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata ==

[med-svn] [Git][med-team/rapmap][master] Updated ref to bio.tools

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / rapmap Commits: 7d9a0732 by Steffen Möller at 2019-03-10T12:50:04Z Updated ref to bio.tools - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata ===

[med-svn] [Git][med-team/sparta][master] Added ref to bio.tools

2019-03-10 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / sparta Commits: d27cfa6b by Steffen Möller at 2019-03-10T12:48:49Z Added ref to bio.tools - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata =

[med-svn] [Git][med-team/policy][master] Nested inline emumeration

2019-03-10 Thread Alexander Nikolaev
Alexander Nikolaev pushed to branch master at Debian Med / policy Commits: 1c88c50a by Alexander Nikolaev at 2019-03-10T11:20:16Z Nested inline emumeration - - - - - 1 changed file: - 2019-03-09_notes.rst Changes: = 2019-03-09_notes.rst =

[med-svn] [Git][med-team/python-pycosat] Pushed new branch upstream

2019-03-10 Thread Andreas Tille
Andreas Tille pushed new branch upstream at Debian Med / python-pycosat -- View it on GitLab: https://salsa.debian.org/med-team/python-pycosat/tree/upstream You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit

[med-svn] [Git][med-team/python-pycosat] Pushed new tag upstream/0.6.3+dfsg

2019-03-10 Thread Andreas Tille
Andreas Tille pushed new tag upstream/0.6.3+dfsg at Debian Med / python-pycosat -- View it on GitLab: https://salsa.debian.org/med-team/python-pycosat/tree/upstream/0.6.3+dfsg You're receiving this email because of your account on salsa.debian.org. ___

[med-svn] [Git][med-team/community/helper-scripts][master] 2 commits: Create backup of output file

2019-03-10 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / community / helper-scripts Commits: 23e64672 by Andreas Tille at 2019-03-10T10:59:05Z Create backup of output file - - - - - 674934d0 by Andreas Tille at 2019-03-10T11:01:34Z Explain how to create a .ssh/salsarc file - - - - - 2 changed fi

[med-svn] [Git][med-team/conda][master] Add some build-depends + todo

2019-03-10 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / conda Commits: 00baa316 by Andreas Tille at 2019-03-10T10:38:19Z Add some build-depends + todo - - - - - 3 changed files: - debian/changelog - debian/control - debian/rules Changes: = debian/changelog

[med-svn] [Git][med-team/galaxy-lib][master] make autopkgtests

2019-03-10 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / galaxy-lib Commits: 74e350c7 by Michael R. Crusoe at 2019-03-10T10:35:25Z make autopkgtests - - - - - 5 changed files: - + debian/README.test - debian/docs - + debian/examples - + debian/tests/control - + debian/tests/run-unit-test C

[med-svn] [Git][med-team/policy][master] Steps 2--5

2019-03-10 Thread Alexander Nikolaev
Alexander Nikolaev pushed to branch master at Debian Med / policy Commits: 5826cab8 by Alexander Nikolaev at 2019-03-10T10:18:45Z Steps 2--5 - - - - - 1 changed file: - 2019-03-09_notes.rst Changes: = 2019-03-09_notes.rst

[med-svn] [Git][med-team/policy][master] Link fixed

2019-03-10 Thread Alexander Nikolaev
Alexander Nikolaev pushed to branch master at Debian Med / policy Commits: d42e4631 by Alexander Nikolaev at 2019-03-10T10:12:02Z Link fixed - - - - - 1 changed file: - 2019-03-09_notes.rst Changes: = 2019-03-09_notes.rst

[med-svn] [Git][med-team/policy][master] Begging of the steps

2019-03-10 Thread Alexander Nikolaev
Alexander Nikolaev pushed to branch master at Debian Med / policy Commits: 3818620d by Alexander Nikolaev at 2019-03-10T10:10:49Z Begging of the steps - - - - - 1 changed file: - 2019-03-09_notes.rst Changes: = 2019-03-09_notes.rst ==

[med-svn] [Git][med-team/galaxy-lib][master] 2 commits: drop python2 package

2019-03-10 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / galaxy-lib Commits: 5fb26896 by Michael R. Crusoe at 2019-03-10T07:40:47Z drop python2 package - - - - - 802344d6 by Michael R. Crusoe at 2019-03-10T10:05:28Z run tests, ship docs - - - - - 7 changed files: - debian/control - + debian

[med-svn] [Git][med-team/policy][master] 2019-03-09 Notes Table of Contents Added

2019-03-10 Thread Alexander Nikolaev
Alexander Nikolaev pushed to branch master at Debian Med / policy Commits: 8478b77c by Alexander Nikolaev at 2019-03-10T09:59:45Z 2019-03-09 Notes Table of Contents Added Adding the Table of Contents for the 2019-03-09 notes - - - - - 1 changed file: - 2019-03-09_notes.rst Changes: ==

[med-svn] [Git][med-team/policy][master] 2019-03-09 Notes

2019-03-10 Thread Alexander Nikolaev
Alexander Nikolaev pushed to branch master at Debian Med / policy Commits: 7197a4a7 by Alexander Nikolaev at 2019-03-10T09:55:09Z 2019-03-09 Notes Adding the notes from the packaging session on 2019-03-09 (Sprint 9). - - - - - 1 changed file: - + 2019-03-09_notes.rst Changes:

[med-svn] [Git][med-team/hhsuite][master] 2 commits: Revoking executable permission from Perl modules.

2019-03-10 Thread Andrius Merkys
Andrius Merkys pushed to branch master at Debian Med / hhsuite Commits: e6febd48 by Andrius Merkys at 2019-03-10T09:53:51Z Revoking executable permission from Perl modules. - - - - - 8dccef38 by Andrius Merkys at 2019-03-10T09:55:35Z Updating debian/changelog. - - - - - 3 changed files: - de

[med-svn] [Git][med-team/mach-haplotyper][master] add bio.tools reference

2019-03-10 Thread Hervé Ménager
Hervé Ménager pushed to branch master at Debian Med / mach-haplotyper Commits: 15ebad1b by Hervé Ménager at 2019-03-10T08:52:47Z add bio.tools reference - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata =

[med-svn] [Git][med-team/python-pyfaidx][master] add bio.tools ref

2019-03-10 Thread Hervé Ménager
Hervé Ménager pushed to branch master at Debian Med / python-pyfaidx Commits: 79c0ed06 by Hervé Ménager at 2019-03-10T08:38:46Z add bio.tools ref - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata

[med-svn] [Git][med-team/ray][master] add bio.tools ref

2019-03-10 Thread Hervé Ménager
Hervé Ménager pushed to branch master at Debian Med / ray Commits: 5858f657 by Hervé Ménager at 2019-03-10T08:36:00Z add bio.tools ref - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata ===

[med-svn] [Git][med-team/htseq][master] add bio.tools ref

2019-03-10 Thread Hervé Ménager
Hervé Ménager pushed to branch master at Debian Med / htseq Commits: f19c54ab by Hervé Ménager at 2019-03-10T08:33:55Z add bio.tools ref - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata =

[med-svn] [Git][med-team/ngs-sdk][pristine-tar] pristine-tar data for ngs-sdk_2.9.4.orig.tar.gz

2019-03-10 Thread Andrius Merkys
Andrius Merkys pushed to branch pristine-tar at Debian Med / ngs-sdk Commits: 4a48cc3a by Andrius Merkys at 2019-03-10T08:13:15Z pristine-tar data for ngs-sdk_2.9.4.orig.tar.gz - - - - - 2 changed files: - + ngs-sdk_2.9.4.orig.tar.gz.delta - + ngs-sdk_2.9.4.orig.tar.gz.id Changes:

[med-svn] [Git][med-team/ngs-sdk] Pushed new tag upstream/2.9.4

2019-03-10 Thread Andrius Merkys
Andrius Merkys pushed new tag upstream/2.9.4 at Debian Med / ngs-sdk -- View it on GitLab: https://salsa.debian.org/med-team/ngs-sdk/tree/upstream/2.9.4 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit maili

[med-svn] [Git][med-team/ngs-sdk][upstream] New upstream version 2.9.4

2019-03-10 Thread Andrius Merkys
Andrius Merkys pushed to branch upstream at Debian Med / ngs-sdk Commits: 89bed4fd by Andrius Merkys at 2019-03-10T08:13:09Z New upstream version 2.9.4 - - - - - 30 changed files: - .gitignore - − CHANGES - CHANGES.md - ngs-bam/Makefile.vers - ngs-bam/ngs-bam.cpp - ngs-java/Makefile.vers - ngs

[med-svn] [Git][med-team/ngs-sdk][master] 3 commits: New upstream version 2.9.4

2019-03-10 Thread Andrius Merkys
Andrius Merkys pushed to branch master at Debian Med / ngs-sdk Commits: 89bed4fd by Andrius Merkys at 2019-03-10T08:13:09Z New upstream version 2.9.4 - - - - - 779e6530 by Andrius Merkys at 2019-03-10T08:13:15Z Update upstream source from tag 'upstream/2.9.4' Update to upstream version '2.9.4' w

[med-svn] [Git][med-team/inspect][master] add bio.tools ref

2019-03-10 Thread Hervé Ménager
Hervé Ménager pushed to branch master at Debian Med / inspect Commits: a8b262f1 by Hervé Ménager at 2019-03-10T08:18:18Z add bio.tools ref - - - - - 1 changed file: - debian/upstream/metadata Changes: = debian/upstream/metadata ===