Michael R. Crusoe pushed to branch master at Debian Med / bcbio
Commits: d9e2b213 by Michael R. Crusoe at 2019-02-10T08:40:50Z New upstream version 1.1.3 - - - - - d4433341 by Michael R. Crusoe at 2019-02-10T08:41:40Z Update upstream source from tag 'upstream/1.1.3' Update to upstream version '1.1.3' with Debian dir 66b4b7739104633ad67c5c4511f4d60bbbd50333 - - - - - 8d2a4655 by Michael R. Crusoe at 2019-02-10T08:42:51Z new upstream release - - - - - 5d78e887 by Michael R. Crusoe at 2019-02-10T08:45:24Z debian/patches/python3.patch: removed, applied upstream - - - - - b2ff8b83 by Michael R. Crusoe at 2019-02-10T08:55:30Z add ${sphinxdoc:Built-Using} to -doc - - - - - 0b8fbcfe by Michael R. Crusoe at 2019-02-10T09:07:58Z fixes a few spelling errors - - - - - 63353604 by Michael R. Crusoe at 2019-02-10T09:07:58Z add pytest to enable running the tests - - - - - f188722a by Michael R. Crusoe at 2019-02-10T09:07:59Z python3-bcbio: section is "python" - - - - - 7b98f981 by Michael R. Crusoe at 2019-02-11T07:13:40Z Add recommendations discovered through testing and make a list of software that needs packaging - - - - - 30 changed files: - .travis.yml - HISTORY.md - bcbio/bam/__init__.py - bcbio/bam/callable.py - bcbio/bam/cram.py - bcbio/bam/fastq.py - bcbio/broad/__init__.py - bcbio/cwl/create.py - bcbio/cwl/cwlutils.py - bcbio/cwl/defs.py - bcbio/cwl/hpc.py - bcbio/cwl/tool.py - bcbio/cwl/workflow.py - bcbio/distributed/multi.py - bcbio/distributed/objectstore.py - bcbio/distributed/resources.py - bcbio/distributed/runfn.py - bcbio/distributed/split.py - bcbio/galaxy/api.py - bcbio/galaxy/nglims.py - bcbio/graph/graph.py - bcbio/heterogeneity/bubbletree.py - bcbio/heterogeneity/chromhacks.py - bcbio/heterogeneity/loh.py - bcbio/hla/bwakit.py - bcbio/illumina/flowcell.py - bcbio/illumina/machine.py - bcbio/illumina/samplesheet.py - bcbio/illumina/transfer.py - bcbio/install.py The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/bcbio/compare/5e2407d63b681f9fa7949220147f279132213c62...7b98f981e77e80d109e7b14e4cacc2e544a480a1 -- View it on GitLab: https://salsa.debian.org/med-team/bcbio/compare/5e2407d63b681f9fa7949220147f279132213c62...7b98f981e77e80d109e7b14e4cacc2e544a480a1 You're receiving this email because of your account on salsa.debian.org.
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