Steffen Möller pushed to branch upstream at Debian Med / gubbins
Commits: 292f4685 by Steffen Moeller at 2020-01-08T12:59:28+01:00 New upstream version 2.4.0 - - - - - 30 changed files: - Dockerfile - README.md - VERSION - − depcomp - example_data/PMEN1/README.md - install_dependencies.sh - − ltmain.sh - − missing - python/gubbins/PreProcessFasta.py - − python/gubbins/RAxMLExecutable.py - − python/gubbins/RAxMLSequenceReconstruction.py - python/gubbins/common.py - + python/gubbins/tests/__init__.py - + python/gubbins/tests/data/concatenate_fasta_files.aln.expected - python/gubbins/tests/data/raxml_sequence_reconstruction/expected_rooted_tree.newick → python/gubbins/tests/data/expected_rooted_tree.newick - + python/gubbins/tests/data/further_alignment.aln - + python/gubbins/tests/data/iqtree_ancestral.fasta.expected - + python/gubbins/tests/data/iqtree_ancestral.state - + python/gubbins/tests/data/raxml_ancestral.fasta.expected - + python/gubbins/tests/data/raxml_ancestral.state - − python/gubbins/tests/data/raxml_sequence_reconstruction/1.fasta - − python/gubbins/tests/data/raxml_sequence_reconstruction/2.fasta - − python/gubbins/tests/data/raxml_sequence_reconstruction/expected_ancestor_sequence_from_raxml - − python/gubbins/tests/data/raxml_sequence_reconstruction/expected_combined_1_2.fasta - − python/gubbins/tests/data/raxml_sequence_reconstruction/expected_marginalAncestralStates.fasta - − python/gubbins/tests/data/raxml_sequence_reconstruction/input_alignment.fasta - − python/gubbins/tests/data/raxml_sequence_reconstruction/raw_marginalAncestralStates.phylip - python/gubbins/tests/data/small_alignment.aln - python/gubbins/tests/data/raxml_sequence_reconstruction/unrooted_tree.newick → python/gubbins/tests/data/unrooted_tree.newick - python/gubbins/tests/test_alignment_python_methods.py The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/gubbins/commit/292f4685c23106a642c39a4c372ca71b9c397b67 -- View it on GitLab: https://salsa.debian.org/med-team/gubbins/commit/292f4685c23106a642c39a4c372ca71b9c397b67 You're receiving this email because of your account on salsa.debian.org.
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