Michael R. Crusoe pushed to branch master at Debian Med / mira
Commits: f1c0778d by Michael R. Crusoe at 2019-02-18T08:30:18Z update homepage URL - - - - - 442690a0 by Michael R. Crusoe at 2019-02-18T08:32:00Z Mark mira-doc as Multi-Arch: foreign - - - - - c162cb46 by Michael R. Crusoe at 2019-02-18T08:44:59Z Secure URI in copyright format; Standards-Version: 4.3.0 - - - - - 087de19d by Michael R. Crusoe at 2019-02-18T08:45:30Z Respect DEB_BUILD_OPTIONS in override_dh_auto_test target - - - - - dde3e4cc by Michael R. Crusoe at 2019-02-18T08:45:32Z Remove trailing whitespace in debian/changelog - - - - - 359c17b9 by Michael R. Crusoe at 2019-02-18T08:45:32Z Remove trailing whitespace in debian/control - - - - - b10f26fe by Michael R. Crusoe at 2019-02-18T08:45:32Z Remove trailing whitespace in debian/copyright - - - - - 4 changed files: - debian/changelog - debian/control - debian/copyright - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,7 +1,18 @@ mira (4.9.6-5) UNRELEASED; urgency=medium + [ Andreas Tille ] * Remove unneeded get-orig-source target + [ Michael R. Crusoe ] + * Update homepage URL + * Mark mira-doc as Multi-Arch: foreign + * Secure URI in copyright format + * Standards-Version: 4.3.0; no changes needed + * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target + * Remove trailing whitespace in debian/changelog + * Remove trailing whitespace in debian/control + * Remove trailing whitespace in debian/copyright + -- Andreas Tille <ti...@debian.org> Wed, 19 Sep 2018 22:41:27 +0200 mira (4.9.6-4) unstable; urgency=medium @@ -21,7 +32,7 @@ mira (4.9.6-4) unstable; urgency=medium mira (4.9.6-3) unstable; urgency=medium * Team upload. - + [ Nadiya Sitdykova ] * Add autopkgtest test-suite for denovo, mapping and est assembly @@ -111,7 +122,7 @@ mira (4.0.2-1) unstable; urgency=low mira (4.0-1) unstable; urgency=low [ Thorsten Alteholz ] - * New upstream version + * New upstream version * debian/rules: add boost dir in auto_configure (Closes: #735798) [ Andreas Tille ] @@ -151,7 +162,7 @@ mira (3.9.17-1) unstable; urgency=low * Add boost-minimal patch, to add boost-libraries in final linking, fixing FTBFS (Closes: #701322) * Enable parallel builds, to speed up compilation. - + [ Andreas Tille ] * delete debian/README.source which is outdated / wrong * debian/*.1: Wrote / reviewed manpages for all installed programs ===================================== debian/control ===================================== @@ -25,10 +25,10 @@ Build-Depends: debhelper (>= 11~), libboost-iostreams-dev Build-Depends-Indep: docbook-xsl, dblatex -Standards-Version: 4.2.1 +Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/mira Vcs-Git: https://salsa.debian.org/med-team/mira.git -Homepage: http://chevreux.org/projects_mira.html +Homepage: https://sourceforge.net/p/mira-assembler/wiki/Home/ Package: mira-assembler Architecture: any @@ -51,7 +51,7 @@ Description: Whole Genome Shotgun and EST Sequence Assembler sources for oligo design in clinical microarray experiments. . The package provides the following executables: - Binaries provided: + Binaries provided: * mira: for assembly of genome sequences * miramem: estimating memory needed to assemble projects. * mirabait: a "grep" like tool to select reads with kmers up to 256 bases. @@ -73,6 +73,7 @@ Description: extract of RFAM 12 rRNA database Package: mira-doc Architecture: all +Multi-Arch: foreign Section: doc Depends: ${misc:Depends} Suggests: mira-assembler ===================================== debian/copyright ===================================== @@ -1,4 +1,4 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Contact: Bastien Chevreux <b...@chevreux.org> Source: http://jaist.dl.sourceforge.net/project/mira-assembler/MIRA/V3rc2/mira-3rc2.tar.bz2 @@ -6,7 +6,7 @@ Files: * Copyright: © 1997-2000 for MIRA V1.x and EdIt: Bastien Chevreux, Thomas Pfisterer, Deutsches Krebsforschungszentrum Heidelberg -- Dept. of Molecula Biophysics. © 2001-2013 for MIRA V2.x: Bastien Chevreux <b...@chevreux.org> License: GPL-2+ -Comment: +Comment: Author of MIRA . Bastien Chevreux, formerly at the German Cancer Research Center (Deutsches ===================================== debian/rules ===================================== @@ -23,9 +23,14 @@ override_dh_auto_install-indep: doc/docbook/doccss doc/docbook/DefinitiveGuideToMIRA.html || true override_dh_auto_test-arch: +ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) make check +endif override_dh_auto_test-indep: +ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) + echo no tests for -indep +endif override_dh_auto_build-arch: # some *.cc files are created by old flex version which breaks the build View it on GitLab: https://salsa.debian.org/med-team/mira/compare/bd57345c43498604d6074d13249715b8a7e0b4fe...b10f26feb902d659c2d1c5b8e59e79bca24f4759 -- View it on GitLab: https://salsa.debian.org/med-team/mira/compare/bd57345c43498604d6074d13249715b8a7e0b4fe...b10f26feb902d659c2d1c5b8e59e79bca24f4759 You're receiving this email because of your account on salsa.debian.org.
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