Andreas Tille pushed to branch master at Debian Med / q2-emperor
Commits:
97cbc8be by Andreas Tille at 2024-02-18T13:05:30+01:00
Autopkgtest for all supported Python3 versions
- - - - -
3326c3a9 by Andreas Tille at 2024-02-18T14:29:34+01:00
New upstream version 2024.2.0
- - - - -
8aafebac by Andreas Tille at 2024-02-18T14:29:34+01:00
routine-update: New upstream version
- - - - -
3f69f77c by Andreas Tille at 2024-02-18T14:29:34+01:00
Update upstream source from tag 'upstream/2024.2.0'
Update to upstream version '2024.2.0'
with Debian dir bdee3069c1ad7786f4a3ebeb6180c729ad334626
- - - - -
3597679c by Andreas Tille at 2024-02-18T14:29:52+01:00
routine-update: Regenerate debian/control from debian/control.in
- - - - -
c59044fc by Andreas Tille at 2024-02-18T14:31:26+01:00
routine-update: Ready to upload to unstable
- - - - -
8 changed files:
- .github/workflows/ci-dev.yaml
- README.md
- ci/recipe/meta.yaml
- debian/changelog
- debian/control
- debian/tests/control
- debian/tests/run-unit-test
- q2_emperor/_version.py
Changes:
=====================================
.github/workflows/ci-dev.yaml
=====================================
@@ -9,4 +9,4 @@ jobs:
ci:
uses: qiime2/distributions/.github/workflows/lib-ci-dev.yaml@dev
with:
- distro: core
\ No newline at end of file
+ distro: amplicon
=====================================
README.md
=====================================
@@ -1,5 +1,5 @@
# q2-emperor
-
+
This is a QIIME 2 plugin. For details on QIIME 2, see https://qiime2.org.
\ No newline at end of file
=====================================
ci/recipe/meta.yaml
=====================================
@@ -21,7 +21,7 @@ requirements:
- numpy
- pandas {{ pandas }}
- scikit-bio {{ scikit_bio }}
- - emperor ==1.0.3
+ - emperor ==1.0.4
- qiime2 {{ qiime2_epoch }}.*
- q2templates {{ qiime2_epoch }}.*
- q2-types {{ qiime2_epoch }}.*
=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+q2-emperor (2024.2.0-1) unstable; urgency=medium
+
+ * Team upload.
+ * New upstream version
+ * Autopkgtest for all supported Python3 versions
+ * Regenerate debian/control from debian/control.in (routine-update)
+
+ -- Andreas Tille <ti...@debian.org> Sun, 18 Feb 2024 14:29:52 +0100
+
q2-emperor (2023.9.0-1) unstable; urgency=medium
* Team upload.
=====================================
debian/control
=====================================
@@ -12,9 +12,9 @@ Build-Depends: debhelper-compat (= 13),
python3-pytest <!nocheck>,
python3-pytest-cov <!nocheck>,
python3-emperor <!nocheck>,
- qiime (>= 2023.9) <!nocheck>,
- q2templates (>= 2023.9) <!nocheck>,
- q2-types (>= 2023.9) <!nocheck>
+ qiime (>= 2024.2) <!nocheck>,
+ q2templates (>= 2024.2) <!nocheck>,
+ q2-types (>= 2024.2) <!nocheck>
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/q2-emperor
Vcs-Git: https://salsa.debian.org/med-team/q2-emperor.git
@@ -29,9 +29,9 @@ Depends: ${shlibs:Depends},
python3-pandas,
python3-emperor,
python3-distutils,
- q2templates (>= 2023.9),
- q2-types (>= 2023.9),
- qiime (>= 2023.9)
+ q2templates (>= 2024.2),
+ q2-types (>= 2024.2),
+ qiime (>= 2024.2)
Description: QIIME2 plugin for display of ordination plots
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
package with a focus on data and analysis transparency. QIIME 2 enables
=====================================
debian/tests/control
=====================================
@@ -1,3 +1,3 @@
Tests: run-unit-test
-Depends: @, python3-pytest
+Depends: @, python3-pytest, python3-all
Restrictions: allow-stderr, skip-not-installable
=====================================
debian/tests/run-unit-test
=====================================
@@ -18,4 +18,7 @@ if [ ! -e /usr/bin/py.test-3 ] ; then
fi
# Run build-time tests
-py.test-3
+for py in $(py3versions -s 2> /dev/null)
+do
+ ${py} -m pytest -v --cov=${pkg}
+done
=====================================
q2_emperor/_version.py
=====================================
@@ -23,9 +23,9 @@ def get_keywords():
# setup.py/versioneer.py will grep for the variable names, so they must
# each be defined on a line of their own. _version.py will just call
# get_keywords().
- git_refnames = " (tag: 2023.9.0, Release-2023.9)"
- git_full = "f60a1cb418f04e8318daef4afeded4f55f0ea77c"
- git_date = "2023-10-03 21:56:29 +0000"
+ git_refnames = " (tag: 2024.2.0, Release-2024.2)"
+ git_full = "8c5ab8122280eaafcb8b313deebcb81551b96119"
+ git_date = "2024-02-16 21:57:08 +0000"
keywords = {"refnames": git_refnames, "full": git_full, "date": git_date}
return keywords
View it on GitLab:
https://salsa.debian.org/med-team/q2-emperor/-/compare/9a9f4ab9354ae0dab797acf77aff206da5c71ab2...c59044fc48a991435d402b3cf5e683f3c876d708
--
View it on GitLab:
https://salsa.debian.org/med-team/q2-emperor/-/compare/9a9f4ab9354ae0dab797acf77aff206da5c71ab2...c59044fc48a991435d402b3cf5e683f3c876d708
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