This is an automated email from the git hooks/post-receive script. sascha-guest pushed a commit to branch master in repository ariba.
commit 9ef44d9c06a8d068ef99b344c806f94e22a5f539 Author: Sascha Steinbiss <sas...@steinbiss.name> Date: Sat Dec 5 10:55:36 2015 +0000 fix spelling --- debian/patches/series | 1 + debian/patches/spelling | 12 ++++++++++++ 2 files changed, 13 insertions(+) diff --git a/debian/patches/series b/debian/patches/series new file mode 100644 index 0000000..e057d52 --- /dev/null +++ b/debian/patches/series @@ -0,0 +1 @@ +spelling diff --git a/debian/patches/spelling b/debian/patches/spelling new file mode 100644 index 0000000..3ed170a --- /dev/null +++ b/debian/patches/spelling @@ -0,0 +1,12 @@ +Description: Spelling +--- a/ariba/tasks/summary.py ++++ b/ariba/tasks/summary.py +@@ -8,7 +8,7 @@ + epilog = 'Files must be listed after the output file and/or the option --fofn must be used. If both used, all files in the filename specified by --fofn AND the files listed after the output file will be used as input. The input report files must be in tsv format, not xls.') + parser.add_argument('-f', '--fofn', help='File of filenames of ariba reports in tsv format (not xls) to be summarised. Must be used if no input files listed after the outfile.', metavar='FILENAME') + parser.add_argument('--min_id', type=float, help='Minimum percent identity cutoff to count as assembled [%(default)s]', default=90, metavar='FLOAT') +- parser.add_argument('--no_filter', action='store_true', help='Do not filter rows or columns of output that are all 0 (by deafult, they are removed from the output)') ++ parser.add_argument('--no_filter', action='store_true', help='Do not filter rows or columns of output that are all 0 (by default, they are removed from the output)') + parser.add_argument('outfile', help='Name of output file. If file ends with ".xls", then an excel spreadsheet is written. Otherwise a tsv file is written') + parser.add_argument('infiles', nargs='*', help='Files to be summarised') + options = parser.parse_args() -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/ariba.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit