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commit b01be1caedace2886ec7bcafe2932df5defe6129 Author: Afif Elghraoui <a...@ghraoui.name> Date: Sun Sep 20 03:07:49 2015 -0700 Prevent formatting errors in manpages --- debian/man/DBdust.1.md | 2 +- debian/man/fasta2DB.1.md | 6 +++--- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/debian/man/DBdust.1.md b/debian/man/DBdust.1.md index 3f8d957..bb73a79 100644 --- a/debian/man/DBdust.1.md +++ b/debian/man/DBdust.1.md @@ -13,7 +13,7 @@ DBdust - description # DESCRIPTION Runs the symmetric DUST algorithm over the reads in the untrimmed DB *path*.db or -*path*.dam producing a track .*path*.dust[.anno,.data] that marks all intervals of low +*path*.dam producing a track `.`*path*.dust[.anno,.data] that marks all intervals of low complexity sequence, where the scan window is of size **-w**, the threshold for being a low-complexity interval is **-t**, and only perfect intervals of size greater than **-m** are recorded. If the **-b** option is set then the definition of low complexity takes into diff --git a/debian/man/fasta2DB.1.md b/debian/man/fasta2DB.1.md index c1d8713..1d06db6 100644 --- a/debian/man/fasta2DB.1.md +++ b/debian/man/fasta2DB.1.md @@ -13,9 +13,9 @@ fasta2DB - create a Dazzler database from fasta files # DESCRIPTION Builds an initial database, or adds to an existing database, the list of -.fasta files following the database name argument, or if the **-f** option is -used, the list of .fasta files in *file*. A given .fasta file can only be -added once to the DB (this is checked by the command). The .fasta headers must +`.fasta` files following the database name argument, or if the **-f** option is +used, the list of `.fasta` files in *file*. A given `.fasta` file can only be +added once to the DB (this is checked by the command). The `.fasta` headers must be in the "Pacbio" format (i.e. the output of the Pacbio tools or our **dextract**(1) program) and the well, pulse interval, and read quality are extracted from the header and kept with each read record. If the files are -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/dazzdb.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit