Author: tille
Date: 2013-11-28 10:54:40 +0000 (Thu, 28 Nov 2013)
New Revision: 15297
Modified:
trunk/packages/seqan/trunk/debian/changelog
trunk/packages/seqan/trunk/debian/rules
trunk/packages/seqan/trunk/debian/seqan-apps.install
trunk/packages/seqan/trunk/debian/seqan-apps.links
Log:
Fix common typo: sequan -> seqan
Modified: trunk/packages/seqan/trunk/debian/changelog
===================================================================
--- trunk/packages/seqan/trunk/debian/changelog 2013-11-28 10:52:40 UTC (rev
15296)
+++ trunk/packages/seqan/trunk/debian/changelog 2013-11-28 10:54:40 UTC (rev
15297)
@@ -71,7 +71,7 @@
- Build-Depend on zlib1g-dev, as seqan needs to detect zlib to set
SEQAN_HAS_SAMTOOLS to 1.
- Changed Priority from extra to optional.
- - Changed sequan-apps Section from libdevel to science.
+ - Changed seqan-apps Section from libdevel to science.
* debian/patch/samtools.patch corrects path to SAMtools headers.
* Machine-readable debian/copyright.
Modified: trunk/packages/seqan/trunk/debian/rules
===================================================================
--- trunk/packages/seqan/trunk/debian/rules 2013-11-28 10:52:40 UTC (rev
15296)
+++ trunk/packages/seqan/trunk/debian/rules 2013-11-28 10:54:40 UTC (rev
15297)
@@ -20,12 +20,12 @@
# in /usr/bin (via symlink) while others go to /usr/lib/seqan/bin (see
README.Debian)
# mv $(CURDIR)/debian/seqan-apps/usr/bin/join
$(CURDIR)/debian/seqan-apps/usr/bin/seqan-join
#
- # Formerly binaries were installed into usr/lib/sequan/bin/
+ # Formerly binaries were installed into usr/lib/seqan/bin/
# and only some of them were made available in /usr/bin via dh_link
# Since there is no obvious reason for this neither is there any
# documentation that explains the motivation this is commented here.
#for APP in `find $(CURDIR)/obj*/apps -mindepth 1 -maxdepth 1
-executable -type f` ; do \
- # cp -a $$APP $(CURDIR)/debian/seqan-apps/usr/lib/sequan/bin/ ; done
+ # cp -a $$APP $(CURDIR)/debian/seqan-apps/usr/lib/seqan/bin/ ; done
# ------------------------------------------------------------------
# Formerly readmes were named README.app. It seems more consistent
# to keep upstream documentation layout which in addition contains
Modified: trunk/packages/seqan/trunk/debian/seqan-apps.install
===================================================================
--- trunk/packages/seqan/trunk/debian/seqan-apps.install 2013-11-28
10:52:40 UTC (rev 15296)
+++ trunk/packages/seqan/trunk/debian/seqan-apps.install 2013-11-28
10:54:40 UTC (rev 15297)
@@ -1,2 +1,2 @@
-usr/bin usr/lib/sequan
+usr/bin usr/lib/seqan
usr/share/doc/* usr/share/doc/seqan-apps
Modified: trunk/packages/seqan/trunk/debian/seqan-apps.links
===================================================================
--- trunk/packages/seqan/trunk/debian/seqan-apps.links 2013-11-28 10:52:40 UTC
(rev 15296)
+++ trunk/packages/seqan/trunk/debian/seqan-apps.links 2013-11-28 10:54:40 UTC
(rev 15297)
@@ -1,21 +1,21 @@
-usr/lib/sequan/bin/alf usr/bin/alf
-usr/lib/sequan/bin/gustaf usr/bin/gustaf
-usr/lib/sequan/bin/insegt usr/bin/insegt
-usr/lib/sequan/bin/masai_indexer usr/bin/masai_indexer
-usr/lib/sequan/bin/masai_mapper usr/bin/masai_mapper
-usr/lib/sequan/bin/masai_output_pe usr/bin/masai_output_pe
-usr/lib/sequan/bin/masai_output_se usr/bin/masai_output_se
-usr/lib/sequan/bin/mason usr/bin/mason
-usr/lib/sequan/bin/micro_razers usr/bin/micro_razers
-usr/lib/sequan/bin/pair_align usr/bin/pair_align
-usr/lib/sequan/bin/rabema_build_gold_standard
usr/bin/rabema_build_gold_standard
-usr/lib/sequan/bin/rabema_evaluate usr/bin/rabema_evaluate
-usr/lib/sequan/bin/rabema_prepare_sam usr/bin/rabema_prepare_sam
-usr/lib/sequan/bin/razers usr/bin/razers
-usr/lib/sequan/bin/razers3 usr/bin/razers3
-usr/lib/sequan/bin/sak usr/bin/sak
-usr/lib/sequan/bin/seqan_tcoffee usr/bin/seqan_tcoffee
-usr/lib/sequan/bin/snp_store usr/bin/snp_store
-usr/lib/sequan/bin/splazers usr/bin/splazers
-usr/lib/sequan/bin/stellar usr/bin/stellar
-usr/lib/sequan/bin/tree_recon usr/bin/tree_recon
+usr/lib/seqan/bin/alf usr/bin/alf
+usr/lib/seqan/bin/gustaf usr/bin/gustaf
+usr/lib/seqan/bin/insegt usr/bin/insegt
+usr/lib/seqan/bin/masai_indexer usr/bin/masai_indexer
+usr/lib/seqan/bin/masai_mapper usr/bin/masai_mapper
+usr/lib/seqan/bin/masai_output_pe usr/bin/masai_output_pe
+usr/lib/seqan/bin/masai_output_se usr/bin/masai_output_se
+usr/lib/seqan/bin/mason usr/bin/mason
+usr/lib/seqan/bin/micro_razers usr/bin/micro_razers
+usr/lib/seqan/bin/pair_align usr/bin/pair_align
+usr/lib/seqan/bin/rabema_build_gold_standard
usr/bin/rabema_build_gold_standard
+usr/lib/seqan/bin/rabema_evaluate usr/bin/rabema_evaluate
+usr/lib/seqan/bin/rabema_prepare_sam usr/bin/rabema_prepare_sam
+usr/lib/seqan/bin/razers usr/bin/razers
+usr/lib/seqan/bin/razers3 usr/bin/razers3
+usr/lib/seqan/bin/sak usr/bin/sak
+usr/lib/seqan/bin/seqan_tcoffee usr/bin/seqan_tcoffee
+usr/lib/seqan/bin/snp_store usr/bin/snp_store
+usr/lib/seqan/bin/splazers usr/bin/splazers
+usr/lib/seqan/bin/stellar usr/bin/stellar
+usr/lib/seqan/bin/tree_recon usr/bin/tree_recon
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