Re: Bug#956324: Clustalo bus error on mipsel (Was: Bug#956324: python-biopython: FTBFS on mipsel)

2020-04-30 Thread Matthew Fernandez
> One small issue... Valgrind recommends -O0 or -O1 TIL :) Thanks, Jeff! > You can sometimes locate a bus error at build time with -Wcast-align. > At runtime you can usually locate them with -fsanitize=undefined. I had previously tried UBSan and, while it turned up a number of shifting and

Not all files in my package installed

2020-04-30 Thread Tong Sun
Hi, I've never experience this before and I have no clue either, but not all files in my package get installed: -- % apt-get install --reinstall -y dbab . . . Get:1 http://deb.debian.org/debian testing/main amd64 dbab all 1.3.3-1 [22.3 kB] Fetched 22.3 kB in

Bug#959212: RFS: libowfat/0.30-3 [QA] -- Reimplementation of libdjb, shared library

2020-04-30 Thread Sudip Mukherjee
Package: sponsorship-requests Severity: normal Dear mentors, I am looking for a sponsor for my package "libowfat" * Package name: libowfat Version : 0.30-3 Upstream Author : Felix von Leitner * URL : http://www.fefe.de/libowfat/ * License : GPL-2 * Vcs

Re: Bug#956324: Clustalo bus error on mipsel (Was: Bug#956324: python-biopython: FTBFS on mipsel)

2020-04-30 Thread Andreas Tille
Hi Jeffrey, thanks a lot for this analysis. Any chance that somebody could turn this into a patch I could try? Kind regards Andreas. On Thu, Apr 30, 2020 at 03:40:12PM -0400, Jeffrey Walton wrote: > On Fri, Apr 17, 2020 at 7:21 AM Andreas Tille wrote: > > ... > > So it seems the bus

Re: Bug#956324: Clustalo bus error on mipsel (Was: Bug#956324: python-biopython: FTBFS on mipsel)

2020-04-30 Thread Jeffrey Walton
On Fri, Apr 17, 2020 at 7:21 AM Andreas Tille wrote: > ... > So it seems the bus error occures somehow here: > > > https://salsa.debian.org/med-team/clustalo/-/blob/master/src/clustal/pair_dist.c#L346 NewProgress is at

Re: Bug#956324: Clustalo bus error on mipsel (Was: Bug#956324: python-biopython: FTBFS on mipsel)

2020-04-30 Thread Jeffrey Walton
On Fri, Apr 17, 2020 at 7:21 AM Andreas Tille wrote: > > Control: tags -1 help > > as it can be seen on the recent build log of clustalo on mips[1] the > build fails with > > # Run additional test from python-biopython package to verify that > # this will work as well > src/clustalo -i

Re: Bug#956324: Clustalo bus error on mipsel (Was: Bug#956324: python-biopython: FTBFS on mipsel)

2020-04-30 Thread Jeffrey Walton
On Thu, Apr 30, 2020 at 10:33 AM Matthew Fernandez wrote: > > > On Apr 30, 2020, at 00:31, Andreas Tille wrote: > > > > On Wed, Apr 29, 2020 at 05:51:26PM -0700, Matthew Fernandez wrote: > > > >> The other option I suggested was Valgrind, but if you can’t run apt-file > >> you probably can’t

Re: Bug#956324: Clustalo bus error on mipsel (Was: Bug#956324: python-biopython: FTBFS on mipsel)

2020-04-30 Thread Andreas Tille
On Thu, Apr 30, 2020 at 07:17:50AM -0700, Matthew Fernandez wrote: > > Valgrind, in its default mode, checks for a variety of memory issues > (use-after-free, write out-of bounds, …). You don’t need any special > configure/build options, but you probably want to enable debug symbols > (`export

Re: Bug#959178: RFS: eject/2.1.5+deb1+cvs20081104-15 [ITA] -- ejects CDs and operates CD-Changers under Linux

2020-04-30 Thread atzlinux
在 2020/4/30 下午9:20, Adam Borowski 写道: > On Thu, Apr 30, 2020 at 08:42:07PM +0800, atzlinux wrote: >> * Package name : eject >> Version : 2.1.5+deb1+cvs20081104-15 > Somehow, initial whitespace in your mail is corrupted. I am use thunderbird ,xfce. The RFS email  is sended by click "Send the

Re: Bug#956324: Clustalo bus error on mipsel (Was: Bug#956324: python-biopython: FTBFS on mipsel)

2020-04-30 Thread Matthew Fernandez
> On Apr 30, 2020, at 00:31, Andreas Tille wrote: > > On Wed, Apr 29, 2020 at 05:51:26PM -0700, Matthew Fernandez wrote: > >> The other option I suggested was Valgrind, but if you can’t run apt-file you >> probably can’t install Valgrind either. > > Well, I guess apt-get is permitted for

Bug#959181: RFS: lebiniou/3.41-1 -- displays images that evolve with sound

2020-04-30 Thread Olivier Girondel
Package: sponsorship-requests Severity: normal Dear mentors, I am looking for a sponsor for my package "lebiniou": * Package name: lebiniou Version : 3.41-1 Upstream Author : Olivier Girondel * URL : https://biniou.net * License : GPL-2+ Section

Bug#959178: RFS: eject/2.1.5+deb1+cvs20081104-15 [ITA] -- ejects CDs and operates CD-Changers under Linux

2020-04-30 Thread Adam Borowski
On Thu, Apr 30, 2020 at 08:42:07PM +0800, atzlinux wrote: > * Package name : eject > Version : 2.1.5+deb1+cvs20081104-15 Somehow, initial whitespace in your mail is corrupted. > Changes since the last upload: > > [ Petter Reinholdtsen ] > * Split translation part of Debian changes into

Bug#959178: RFS: eject/2.1.5+deb1+cvs20081104-15 [ITA] -- ejects CDs and operates CD-Changers under Linux

2020-04-30 Thread atzlinux
Package: sponsorship-requests Severity: normal Dear mentors, I am looking for a sponsor for my package "eject" * Package name : eject Version : 2.1.5+deb1+cvs20081104-15 Upstream Author : Jeff Tranter (tran...@pobox.com) * URL : http://eject.sourceforge.net/ * License : GPL-2+ * Vcs :

Bug#959171: RFS: r4d/1.5-1 [ITP] -- Remote For Device-under-test (R4D) Daemon

2020-04-30 Thread Bastian Germann
Package: sponsorship-requests Severity: wishlist Dear mentors, I am looking for a sponsor for my package "r4d" * Package name: r4d Version : 1.5-1 Upstream Author : Benedikt Spranger * URL : https://github.com/ci-rt/r4d * License : GPL-3+ * Vcs

Re: Bug#956324: Clustalo bus error on mipsel (Was: Bug#956324: python-biopython: FTBFS on mipsel)

2020-04-30 Thread Andreas Tille
Hi Matthew, On Wed, Apr 29, 2020 at 05:51:26PM -0700, Matthew Fernandez wrote: > > Any more help from debian-mipsel is really appreciated. > > Hm yes, “--disable-libsanitizer” is rather ominous. I guess the mipsel GCC > package has been built without ASan support. Surprising that it fails so >