@@
+linbox (1.6.3-3) unstable; urgency=medium
+
+ * debian/patches/iterator-difference-type.patch
+- New patch; use std::ptrdiff_t for vector iterator difference
+ type (Closes: #987921).
+
+ -- Doug Torrance Sun, 09 May 2021 12:28:04 -0400
+
linbox (1.6.3-2) unstable; urgency=medium
On 7/15/20 5:10 AM, Julien Puydt wrote:
autopkgtest fails because normaliz isn't found : missing dep?
I'm using repo at 5d6728750764153534bfa9c8b673d9a07f05130c.
You should be running autotestpkg using:
autopkgtest $1 -- schroot unstable-amd64-sbuild
that way, the schroot contains only what yo
On 7/13/20 4:21 PM, Doug Torrance wrote:
On 7/13/20 4:08 PM, Julien Puydt wrote:
It builds better, but lintian is quite unhappy :
E: macaulay2: arch-dependent-file-not-in-arch-specific-directory
usr/bin/M2-binary
which according to "lintian-info --tags arch-dependent-file-not-in-
On 7/13/20 4:08 PM, Julien Puydt wrote:
It builds better, but lintian is quite unhappy :
E: macaulay2: arch-dependent-file-not-in-arch-specific-directory
usr/bin/M2-binary
which according to "lintian-info --tags arch-dependent-file-not-in-
arch-specific-directory" means some M-A tag is wrong.
On 7/13/20 10:03 AM, David Bremner wrote:
Doug Torrance writes:
Thanks for the note! I considered using dh_elpa when I decided to split
off the Emacs files into their own binary package. But dh_install
already installs them to the correct place, and there are not any test
suites to run
On 7/13/20 3:11 AM, Julien Puydt wrote:
After I got through the first issues, it ends with :
/bin/echo 'echo -- loaded .gdb-directories\n' >>.gdb-directories
touch .gdbinit.unknown-user
cp .gdbinit.unknown-user .gdbinit
echo '# -*- sh -*-' >.gdb-files
/bin/echo 'echo -- loading .gdb-files\n' >>.
On 7/13/20 8:20 AM, David Bremner wrote:
Doug Torrance writes:
- couldn't the emacs component be another source-package ?
I considered this, but it's too tied to Macaulay2 itself. It doesn't
build by itself; several of the files in the M2-emacs submodule are
generated
On 7/13/20 2:39 AM, Julien Puydt wrote:
I only had a very quick look this morning, just looking at the debian/
directory :
- the maintainer should be :
Maintainer: Debian Science Maintainers <
debian-science-maintain...@alioth-lists.debian.net>
Fixed. (Debian Science policy still shows the .o
On 7/5/20 3:16 AM, Andreas Tille wrote:
Hi Doug,
when attempting to sponsor topcom I get the lintian warnings:
W: topcom source: national-encoding debian/TOPCOM-manual.html
N:
N: A file is not valid UTF-8.
N:
N: Debian has used UTF-8 for many years. Support for national encodings is
N: being ph
On 7/5/20 3:12 AM, Andreas Tille wrote:
Hi Doug,
for coinor-csdp I get the following lintian info:
I: libsdp0: linked-with-obsolete-library libcblas.so.3
usr/lib/x86_64-linux-gnu/libsdp.so.0.0.0
N:
N: This tag is currently only issued for libcblas.so. For an explanation,
N: please continue be
On Thu, Jun 18, 2020 at 2:02 PM Anton Gladky wrote:
>
> Could you please check, what is wrong with pristine-tar file?
>
> gbp:error: Pristine-tar couldn't verify
> "topcom_0.17.8+ds.orig.tar.xz": pristine-tar:
> ...topcom_0.17.8+ds.orig.tar.xz does not match stored hash (expected
> a8f7f02
I wasn
On Wed, Jun 17, 2020 at 4:53 PM Anton Gladky wrote:
> I will take care of it within the next few days.
Wonderful, thank you!
Hi everyone,
I've been looking for a sponsor for topcom for a few weeks now. I've
asked on the Sponsoring of Blends page and the Sage list, but I don't
think I've asked on the main Science list yet!
If anyone would be willing to take a look, the git repository is at:
https://salsa.debian.org/sci
On 08/27/2017 09:06 AM, Doug Torrance wrote:
I went ahead and bumped the uscan version in git for the next upload.
(This will likely be soon, as the i386 build is still failing...)
Another RC bug was opened for frobby due to this failing build, which
I've fixed in git. I've added
On 08/27/2017 03:56 AM, Andreas Tille wrote:
Hi,
On Sat, Aug 26, 2017 at 09:31:30AM +0200, Julien Puydt wrote:
Hi,
Le 26/08/2017 à 00:10, Doug Torrance a écrit :
A week or so ago, I added frobby and cohomcalg to the Sponsoring of
Blends page, but there has not been a response yet. Would
Hello!
A week or so ago, I added frobby and cohomcalg to the Sponsoring of
Blends page, but there has not been a response yet. Would anyone be
willing to look at either of these packages?
https://anonscm.debian.org/git/debian-science/packages/frobby.git
https://anonscm.debian.org/git/debian-
Hi Sébastien,
On 08/06/2017 07:02 AM, Sébastien Villemot wrote:
Le vendredi 04 août 2017 à 21:47 -0400, Doug Torrance a écrit :
Would anyone be able to sponsor mathic and mathicgb?
I've uploaded new versions to git [1,2] fixing the RC bugs [3,4].
I have reviewed the two packages. This
Would anyone be able to sponsor mathic and mathicgb?
I've uploaded new versions to git [1,2] fixing the RC bugs [3,4].
Thanks!
Doug
P.S. Is the Sponsoring of Blends page [5] still being used? I haven't
had much success there recently when requesting sponsorship.
[1] https://anonscm.debian.
On 02/04/2017 12:25 PM, Upadhaya Brijesh wrote:
Dear Developers of the Debian-Science,
I would like to ask a small favor to add useful numerical libraries
like FGSL (A Fortran interface to the GNU Scientific Library) from
Leibniz super computing center and Lis (Library of Iterative Solvers
d upstream.
* debian/rules
- Add --dbgsym-migration option to dh_strip.
* debian/tests/unittest
- Use upstream unit tests for continuous integration.
-- Doug Torrance Wed, 11 Jan 2017 16:46:27 -0500
Regards,
Doug Torrance
:
https://anonscm.debian.org/git/debian-science/packages/cohomcalg.git
I have also attached a patch to add cohomcalg to the Debian Science blends
mathematics task.
Thanks!
Doug Torrance
>From f9fc2e63b802f289e8d045fa4c416fb441201716 Mon Sep 17 00:00:00 2001
From: Doug Torrance
Date: Sun, 8 Jan 2017 15:48:31
On 08/10/2016 04:28 AM, Tobias Hansen wrote:
For linbox I think Doug will say something when he's ready and needs a
sponsor.
New upstream versions of givaro -> fflas-ffpack -> linbox were just
released, so I'm working on getting them packaged. Givaro's in NEW
right now (SONAME version bump).
On 07/18/2016 01:53 AM, Julien Puydt wrote:
On 17/07/2016 19:54, Doug Torrance wrote:
I see that you've recently pushed some changes to git which close the RC
bug #811847 [1]. Were you planning on uploading them? I ask because
givaro is currently scheduled for auto-removal from testing.
Hi Julien,
I see that you've recently pushed some changes to git which close the RC
bug #811847 [1]. Were you planning on uploading them? I ask because
givaro is currently scheduled for auto-removal from testing. I'm also
interested in givaro as it is a dependency for Macaulay2, which I'm
Package: wnpp
Severity: wishlist
Owner: Doug Torrance
* Package name: phcpack
Version : 2.4.14
Upstream Author : Jan Verschelde
* URL : https://github.com/janverschelde/PHCpack
* License : GPL-2+
Programming Lang: Ada
Description : General-purpose
On 04/03/2016 02:41 AM, Andreas Tille wrote:
On Wed, Mar 30, 2016 at 10:16:34AM -0400, Doug Torrance wrote:
However, despite having pushed my original change to git on the 26th [1], it
still hasn't been reflected on the policy webpage [2]. According to [3], it
should be updated by a cro
On 03/30/2016 06:49 AM, Andreas Tille wrote:
On Sat, Mar 26, 2016 at 04:46:14PM -0400, Doug Torrance wrote:
On 03/26/2016 04:37 PM, Christian T. Steigies wrote:
It seems the Lintian page could need an update, as well as the
debian-science-policy page? Oh, it is more than two years old, it was
On 03/26/2016 04:37 PM, Christian T. Steigies wrote:
Hi,
I am impressed, four answers within minutes, during "the" match of the year.
On Sat, Mar 26, 2016 at 12:49:18PM -0700, Afif Elghraoui wrote:
There should be a "git" before debian-science:
https://anonscm.debian.org/git/debian-science
On 03/26/2016 03:36 PM, Christian T. Steigies wrote:
> Hi,
> there is a lintian warning when you use Vcs fields as described in:
> http://debian-science.alioth.debian.org/debian-science-policy.html
>
> But the browser and git fields are working with this setting.
>
> When I follow the lintian rec
-shared to override_dh_auto_configure target.
- Enable all hardening flags.
-- Doug Torrance Thu, 03 Mar 2016 09:11:23 -0500
Regards,
Doug Torrance
On Sun, Jan 24, 2016, 3:28 AM Andreas Tille wrote:
> On Sat, Jan 23, 2016 at 11:55:00AM -0500, Doug Torrance wrote:
> > > developers. I've updated the package and pushed the changes to git.
> > > Would anyone be able to sponsor? I've added a line to the SoB page.
Hi everyone,
On Sat, Oct 31, 2015 at 9:53 AM, Doug Torrance wrote:
> Upstream maintenance of mathicgb has been taken over by the Macaulay2
> developers. I've updated the package and pushed the changes to git.
> Would anyone be able to sponsor? I've added a line to the SoB
Package: wnpp
Severity: wishlist
Owner: Doug Torrance
* Package name: webwork-pg
Version : 2.10
Upstream Author : Mathematica Association of America
Upstream Author : Mathematical Association of America
* URL : http://webwork.maa.org/
* License : GPL
Package: wnpp
Severity: wishlist
Owner: Doug Torrance
* Package name: webwork
Version : 2.10
Upstream Author : Mathematical Association of America
* URL : http://webwork.maa.org/
* License : GPL/Artistic
Programming Lang: Perl
Description : Open source
Hi everyone,
Upstream maintenance of mathicgb has been taken over by the Macaulay2
developers. I've updated the package and pushed the changes to git.
Would anyone be able to sponsor? I've added a line to the SoB page.
Thanks!
Doug
Hi everyone,
I've changed email addresses, and so I am beginning to update my
packages with the new information. The first is memtailor. Would
anyone be able to sponsor? I've added it to the SoB page.
Thanks!
Doug
Hi everyone,
I've noticed that all my Debian Science (as well as my non-Science, but
also hosted on Alioth) packages are showing ERROR under the VCS column
of my DDPO page [1]. The errors are of the form:
Error: fatal: unable to access
'https://anonscm.debian.org/git/debian-science/packages/math
Hi everyone,
Unfortunately I received the following message from the FTP masters.
On 07/12/2015 04:00 PM, Thorsten Alteholz wrote:
unfortunately I have to reject your package.
Please add the missing license of:
Geneagrapher-master\bootstrap.py
to your debian/copyright.
I have corrected th
erity: wishlist
Owner: Doug Torrance
* Package name: geneagrapher
Version : 1.0c2+git20120704
Upstream Author : David Alber
* URL : http://www.davidalber.net/geneagrapher/
* License : Expat
Programming Lang: Python
Description : Create tree from Mathem
On Mon, Apr 6, 2015 at 12:04 PM, Andreas Tille wrote:
> I noticed that you added a new line to SoB page and thus I had a look on
> the package wearing my mentors hat. Unfortunately it does not build due to
> two missing Build-Depends:
>
>
> The following packages have unmet dependencies:
> pbuil
On 06/20/2015 02:05 AM, Doug Torrance wrote:
The new -3 package built just fine on kfreebsd*, but it failed on
mipsel. Looking at the build logs, it looks like it was using
dpkg-dev version 1.17.24, and the arch-bits tag, which I'm using the
symbols file, isn't introduced un
On 06/20/2015 12:58 AM, Anton Gladky wrote:
I sponsored memtailor. Please pay attention that build
fails on kfreebsd*-archs due to wrong symbols. Not critical
though. I think this symbol-system is a very good idea,
but its maintainance is just a pain. I dropped it from all of
my packages.
I will
On 06/10/2015 12:09 PM, Doug Torrance wrote:
A package I had worked on several months ago, memtailor, finally
cleared the NEW queue a few days ago. After reading the build logs, I
noticed that it was failing to build on 32-bit architectures due to
the symbols file.
I've fixed this and
On 06/10/2015 01:01 PM, Anton Gladky wrote:
Done. Please tag git-repo properly.
Thanks, Anton! The tags are up-to-date now.
--
To UNSUBSCRIBE, email to debian-science-requ...@lists.debian.org
with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
Archive: https://lists
+ * debian/libmemtailor0.symbols
+ - Add arch-bits tags to certain symbols to enable builds on 32-bit
+ architectures.
+ * debian/tests/*
+ - Add test.
+
+ -- Doug Torrance Tue, 09 Jun 2015
10:18:24 -0500
+
memtailor (1.0~git20130809-1) unstable; urgency=low
* Initial release (Closes: #780766)
Hi everyone,
On 04/01/2015 07:37 AM, Andreas Tille wrote:
On Wed, Apr 01, 2015 at 06:48:43AM -0500, Doug Torrance wrote:
I've just added a new math library, mathic, to the Debian Science
git repository. It will be an eventual dependency of Macaulay2.
Thanks for working on this.
Com
On 04/07/2015 01:55 AM, Andreas Tille wrote:
As you know we need to wait for libmemtailor-dev and thus as I said
please ping me about this.
Will do.
BTW, I noticed that you did some patches to get gtest working which is
great. I know that gtest is a bit tricky. I also like that you
invente
On 04/07/2015 01:14 AM, Andreas Tille wrote:
Hi Doug,
On Mon, Apr 06, 2015 at 04:36:56PM -0500, Doug Torrance wrote:
May be we need to start the chain of dependencies one step more back?
Yeah, I probably should have been a little more clear in my initial
email to the list about mathicgb. It
>From 7f6d619890b0b014ee3d3da160c52f7b09efa23a Mon Sep 17 00:00:00 2001
From: Doug Torrance
Date: Mon, 6 Apr 2015 16:30:19 -0500
Subject: [PATCH] Add frobby, mathic, and memtailor.
---
tasks/mathematics | 2 ++
tasks/mathematics-dev | 4
tasks/tools | 1 +
3 files changed, 7 insertions(+)
diff
Thanks!
Doug
>From 9906ea0ecbcf544cf147cd941e72aa43d8626346 Mon Sep 17 00:00:00 2001
From: Doug Torrance
Date: Sun, 5 Apr 2015 06:41:50 -0500
Subject: [PATCH] Add Macaulay2
---
tasks/mathematics | 9 +
1 file changed, 9 insertions(+)
diff --git a/tasks/mathematics b/tasks/mathematics
index da20f83..2d9
Hi everyone,
I've packaged another math library and future Macaulay2 dependency,
mathicgb, and pushed it to git. It is used to calculate Groebner bases.
If anyone has any comments or is willing to sponsor it, I'd appreciate it!
https://anonscm.debian.org/git/debian-science/packages/mathicgb.
Hi Kingsley,
On 04/01/2015 04:36 PM, Kingsley G. Morse Jr. wrote:
What does mathic do?
It's a library containing data structures for use when calculating
Groebner bases. Note that it doesn't actually calculate Groebner
bases. That's done by another library, mathicgb, by the same upstream
Hi everyone,
I've just added a new math library, mathic, to the Debian Science git
repository. It will be an eventual dependency of Macaulay2.
Comments are welcome, and if anyone would like to sponsor it, I would
greatly appreciate it. Note that it depends on memtailor, which is
still in N
On 03/22/2015 07:41 AM, Anton Gladky wrote:
Just a suggestion for the future uploads. Think about adding
autopkgtest (DEP-8), so you can profit from new Debian continuous
integration. Also autotest during build are usually useful.
I'll check it out.
Next time, please, no need to upload packag
On 03/22/2015 04:15 AM, Anton Gladky wrote:
I have uploaded both of your packages. But I needed to drop
symbols-file from frobby as lintian returns an error [1]. You will
be able to add it again during next uploads. From an experience,
maintaining of those symbol-files is always a pain. But you
On 03/19/2015 02:00 PM, Anton Gladky wrote:
just some short notes.
Thanks for the comments, Anton!
2015-03-19 19:05 GMT+01:00 Torrance, Douglas :
https://anonscm.debian.org/git/debian-science/packages/frobby.git
http://mentors.debian.net/debian/pool/main/f/frobby/frobby_0.9.0-1.dsc
looks go
On 03/19/2015 10:05 AM, Yaroslav Halchenko wrote:
On Thu, 19 Mar 2015, Andreas Tille wrote:
Usually predependencies are created by those people who are interested
in the final package. If the final package is maintained by Debian
Science I'd call it perfectly consequently that Debian Science a
On 03/15/2015 06:29 PM, Jerome BENOIT wrote:
I have just deposit a fix at Alioth.
So now the following command may work:
pkg-config --cflags --libs singular
and in a configure.ac file the following
PKG_CHECK_MODULES([SINGULAR],[singular])
may set up SINGULAR_LIBS and SINGULAR_CFLAGS
Excelle
Jerome and Felix -
Thank you so much for your comments -- that makes perfect sense! Forgive
me for jumping to conclusions. I just panicked when it didn't work out
of the box. I'll play around with pkg-config and CPPFLAGS with
Macaulay2 and let you know if I have any further questions.
Doug
Hello!
As I mentioned in my earlier emails regarding MPIR, I'm currently
working on packaging Macaulay2, which also depends on some of the
libraries from Singular.
I was pleased to see that Singular was recently packaged by Jerome and
is sitting in NEW. I checked it out from git, built and
On 03/13/2015 09:42 PM, Doug Torrance wrote:
I'll also contact upstream and see if they can provide any insight.
Here was upstream's response:
My advice would be to stick with the official GNU package if you have
concerns.
So I've removed MPIR from mentors. My work is
On 03/13/2015 02:20 PM, Tobias Hansen wrote:
Before this is uploaded we should maybe talk about what it means to have
two libraries which define the same symbols around. I'm not totally sure
about this but this is what I think the problem is:
Let's say we have gmp and mpir in Debian and after a
ain/m/mpir/mpir_2.6.0+dfsg1-1.dsc
Thanks,
Doug Torrance
P.S. My apologies if this ends up being a double-post. I tried sending
this earlier from another email address but it didn't appear to go through.
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