Accepted python-xarray 0.10.2-1 (source all) into unstable

2018-03-15 Thread Alastair McKinstry
: Alastair McKinstry Description: python-xarray-doc - documentation for xarray python3-xarray - N-D labeled arrays and datasets in Python 3 Changes: python-xarray (0.10.2-1) unstable; urgency=medium . * New upstream release * Add build-dep on python3-cloudpickle, python3-toolz Checksums-Sha1

Accepted qd 2.3.20+dfsg.1-1 (source amd64) into unstable

2018-03-15 Thread Alastair McKinstry
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 12 Mar 2018 12:29:36 + Source: qd Binary: libqd-dev libqd0v5 Architecture: source amd64 Version: 2.3.20+dfsg.1-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Alastair

Accepted mpich 3.3~b1-5 (source amd64 all) into experimental

2018-02-26 Thread Alastair McKinstry
Changed-By: Alastair McKinstry Description: libmpich-dev - Development files for MPICH libmpich12 - Shared libraries for MPICH mpich - Implementation of the MPI Message Passing Interface standard mpich-doc - Documentation for MPICH Closes: 891348 Changes: mpich (3.3~b1-5) experimental

Accepted mpich 3.3~b1-4 (source amd64 all) into experimental

2018-02-06 Thread Alastair McKinstry
Changed-By: Alastair McKinstry Description: libmpich-dev - Development files for MPICH libmpich12 - Shared libraries for MPICH mpich - Implementation of the MPI Message Passing Interface standard mpich-doc - Documentation for MPICH Changes: mpich (3.3~b1-4) experimental; urgency=medium

Changing maintainer for mpich to debian-hpc

2018-01-24 Thread Alastair McKinstry
Hi, I propose to change the Maintainer: for mpich from "Debian Science Maintainers" which is an Alioth list, to debian-...@lists.debian.org. Any comments or objections? regards Alastair McKinstry -- Alastair McKinstry, , , https://diaspora.sceal.ie/u/amckinstry Misentropy: dou

Re: Bug#886644: openmpi: alternatives for libmpi*.so are not multiarch-safe

2018-01-24 Thread Alastair McKinstry
tors (Xeon Phi, GPUs, etc.) building mpi libraries (and mpi-using libraries) on these archs. Comments, please. Best regards Alastair McKinstry On 08/01/2018 12:01, Alastair McKinstry wrote: > Package: openmpi > Severity: important > > openmpi installs links via alternatives

conflicts between VTK/XDMF and libloki

2016-12-05 Thread Alastair McKinstry
https://sources.debian.net/src/libloki/0.1.7-3/include/loki/Visitor.h/ and https://sources.debian.net/src/xdmf/3.0%2Bgit20160803-1/core/loki/Visitor.h/ ) I'm at a loss what to do at this point - can the libloki and VTK packagers give an opinion? Best regards Alastair -- Alastair McKinstry,

Bug#837012: tachyon: FTBFS: ld: tachyon_ogl-glwin.o: undefined reference to symbol 'XNextEvent'

2016-09-12 Thread Alastair McKinstry
loses: #837012. + + -- Alastair McKinstry Mon, 12 Sep 2016 14:12:26 +0100 + tachyon (0.99~b6+dsx-5) unstable; urgency=medium * Debianization: diff -Nru tachyon-0.99~b6+dsx/debian/patches/series tachyon-0.99~b6+dsx/debian/patches/series --- tachyon-0.99~b6+dsx/debian/patches/series2016-08-

Bug#833425: Aw: Re: Bug#833425: mpi-defaults: switch to openmpi on hppa architecture

2016-08-04 Thread Alastair McKinstry
oost1.6.1 > to check if the mpi-defaults change will help. I expect a result during > the next few hours. I'll let you know of the outcome. > > Helge > Alastair, as OpenMPI maintainer. -- Alastair McKinstry, , , https://diaspora.sceal.ie/u/amckinstry Misentropy: doubting that the

Upgrading OpenMPI libraries

2016-07-27 Thread Alastair McKinstry
cessed via RPATH from the libopenmpi* libraries * Add versioned symbols to OpenMPI. This would be significant work, and in practice have to be led by Debian (err, yes, I could do it). I'd like comments on this before proceeding. Best regards Alastair -- Alastair McKinstry, , , https://dias

Fwd: [Open MPI Announce] Open MPI v2.0.0 released

2016-07-15 Thread Alastair McKinstry
tiple support / changes. This needs testing. Other things: - Any thoughts on enabling the Java support? Any other opinions on what we should be doing with openmpi at this stage? Regards Alastair McKinstry Forwarded Message Subject:[Open MPI Announce] Open MPI v

Open-CoArrays for gfortran?

2016-05-25 Thread Alastair McKinstry
tried this yet), which in turn uses mpich or openmpi. Before I submit an ITP, has anyone in Debian investigated this? best regards Alastair McKinstry [1] http://www.opencoarrays.org/ [2] https://en.wikipedia.org/wiki/Partitioned_global_address_space -- Alastair McKinstry, , , https://dias

Bug#813261: jhdf is marked for autoremoval from testing

2016-03-19 Thread Alastair McKinstry
5723656 + @@ -1,3 +1,10 @@ +jhdf (2.9-3.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Add SZIP support + + -- Alastair McKinstry Fri, 18 Mar 2016 13:33:15 + + jhdf (2.9-3) unstable; urgency=medium * Team Upload. diff -urN debian.orig/compat debian/compat --- debia

Bug#813791: mumps FTFBS with openmpi1.10 transition

2016-02-05 Thread Alastair McKinstry
+ @@ -1,3 +1,10 @@ +mumps (4.10.0.dfsg-3.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Use pkg-config to get mpif libs + + -- Alastair McKinstry Wed, 03 Feb 2016 11:50:16 + + mumps (4.10.0.dfsg-3) unstable; urgency=low * Added quilt to Build-Depends, seems to be

Bug#813494: mpi-default-dev: Please depend on openmpi (>= 1.10.2 -3 )

2016-02-02 Thread Alastair McKinstry
Package: mpi-default-dev Version: 1.0.2+nmu2 Severity: important Please depend on openmpi >= 1.10.2-3, so that a versioned mpi-defaults-dev can be used. The transition openmpi1.6 -> 1.10 breaks some packages (see e.g. #813490) and the fix involves a versioned dep on openmpi, but the package depen

libdxflib changes

2016-01-04 Thread Alastair McKinstry
The change from -2.5.0.0 would require a transition anyway). Some changes still needed for upload: * update the symbols file * Add a libdxflib.so.3 -> libdxflib.so.3.12.2 * Test transition. best regards Alastair -- Alastair McKinstry, , , https://diaspora.sceal.ie/u/amckinstry Misentropy:

Bug#799340: libgetdata: diff for NMU version 0.9.0-2.1

2016-01-04 Thread Alastair McKinstry
feel free to tell me if I > should delay it longer. > > Regards. > > > -- Alastair McKinstry, , , https://diaspora.sceal.ie/u/amckinstry Misentropy: doubting that the Universe is becoming more disordered. -- debian-science-maintainers mailing list debian-scie

Bug#799340: #799340: breaks on upgrade?

2015-10-30 Thread Alastair McKinstry
cuments > > You want to replace some other packages ... Hi, Can you explain further please? I've installed piuparts and run via sbuild locally and can't get any errors. regards Alastair -- Alastair McKinstry, , t: +353 91 495343 Environmental Sciences Activity Leader, ICH

Bug#764491: About pkg-config for BLAS/LAPACK

2014-10-14 Thread Alastair McKinstry
nt SONAME). > Ah, I didn't realise that /usr/lib/openblas/libblas.so provided the libblas.so SONAME. Thanks, I withdraw that statement. regards Alastair - -- Alastair McKinstry, , , https://diaspora.sceal.ie/u/amckinstry A decent provision for the poor is t

Bug#764491: About pkg-config for BLAS/LAPACK

2014-10-14 Thread Alastair McKinstry
nt SONAME). > Ah, I didn't realise that /usr/lib/openblas/libblas.so provided the libblas.so SONAME. Thanks, I withdraw that statement. regards Alastair - -- Alastair McKinstry, , , https://diaspora.sceal.ie/u/amckinstry A decent provision for the poor is t

Bug#764491: openblas: Please provide pkg-config files for blas, lapack

2014-10-08 Thread Alastair McKinstry
changelog 2014-10-08 12:14:26.233650002 +0100 @@ -1,3 +1,11 @@ +openblas (0.2.11-2.1) UNRELEASED; urgency=medium + + [ Alastair McKinstry ] + * Non-maintainer upload. + * Add blas-openblas.pc file, and blas.pc symlink via update-alternatives + + -- Alastair McKinstry Wed, 08 Oct 2014 12:13:

Bug#764372: Patch attached.

2014-10-07 Thread Alastair McKinstry
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 - -- Alastair McKinstry, , , https://diaspora.sceal.ie/u/amckinstry A decent provision for the poor is the true test of civilization. ~Samuel Johnson, Boswell: Life of Johnson -BEGIN PGP SIGNATURE- Version: GnuPG v1

Bug#764372: Patch attached.

2014-10-07 Thread Alastair McKinstry
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 - -- Alastair McKinstry, , , https://diaspora.sceal.ie/u/amckinstry A decent provision for the poor is the true test of civilization. ~Samuel Johnson, Boswell: Life of Johnson -BEGIN PGP SIGNATURE- Version: GnuPG v1

Bug#764372: blas: Please add pkg-config file for blas

2014-10-07 Thread Alastair McKinstry
Package: blas Severity: wishlist Please add a pkg-config file for blas, with alternatives via update-alternatives See attached patch -- System Information: Debian Release: 7.6 APT prefers stable APT policy: (500, 'stable') Architecture: powerpc (ppc) Kernel: Linux 2.6.32-5-powerpc Locale: L

Bug#756860: Dependency on libxdmf2 causes installation of libvtk5.8

2014-08-05 Thread Alastair McKinstry
h xdmf maintainer? Thanks, Andrey -- Alastair McKinstry , , http://diaspora.sceal.ie/u/amckinstry Anyone who believes exponential growth can go on forever in a finite world is either a madman or an economist - Kenneth Boulter, Economist. -- debian-science-maintainers mailing list debian-s

Bug#756860: Dependency on libxdmf2 causes installation of libvtk5.8

2014-08-02 Thread Alastair McKinstry
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Ok, it appears upstream has moved vtkXDMF support from XDMF to VTK in the 5.8 -> 6.1 transition. I will remove VTK support from XDMF for the vtk6.1 transition then. Thanks Alastair (XDMF maintainer) On 02/08/2014 18:28, Andrey Gursky wrote: ---