Your message dated Fri, 17 Apr 2020 19:00:10 +0000
with message-id <e1jpwdi-00025a...@fasolo.debian.org>
and subject line Bug#956384: fixed in prinseq-lite 0.20.4-1
has caused the Debian Bug report #956384,
regarding ITP: prinseq-lite -- PReprocessing and INformation of SEQuence data
(lite version)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
956384: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=956384
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org>
* Package name : prinseq-lite
Version : 0.20.4
Upstream Author : Robert Schmieder <rschmie...@gmail.com>
* URL : http://prinseq.sourceforge.net/
* License : GPL-3+
Programming Lang: Perl
Description : PReprocessing and INformation of SEQuence data (lite
version)
PRINSEQ will help you to preprocess your genomic or metagenomic sequence data
in FASTA or FASTQ format. It is a tool that generates summary statistics of
sequence and quality data and that is used to filter, reformat and trim
next-generation sequence data. It is particular designed for 454/Roche data,
but can also be used for other types of sequence data. The standalone version
is primarily designed for data preprocessing and does not generate summary
statistics in graphical form.
________________________________________________________________
Greetings,
I intend to give a hand to the Debian Med Team to package
prinseq-lite, which in turn would be a dependency of another
package (or set of packages, yet to ITP) related to the software
suite VirusSeeker:
https://wupathlabs.wustl.edu/virusseeker/
In the prerequisite software, the availability of the
prinseq-lite.pl command is part of the requirements:
https://wupathlabs.wustl.edu/virusseeker/installation/install-prerequisite-software/
Thank you,
Kind Regards,
--
Étienne Mollier <etienne.moll...@mailoo.org>
--- End Message ---
--- Begin Message ---
Source: prinseq-lite
Source-Version: 0.20.4-1
Done: Etienne Mollier <etienne.moll...@mailoo.org>
We believe that the bug you reported is fixed in the latest version of
prinseq-lite, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 956...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Etienne Mollier <etienne.moll...@mailoo.org> (supplier of updated prinseq-lite
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 10 Apr 2020 10:59:46 +0200
Source: prinseq-lite
Binary: prinseq-lite prinseq-lite-examples
Architecture: source all
Version: 0.20.4-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Etienne Mollier <etienne.moll...@mailoo.org>
Description:
prinseq-lite - PReprocessing and INformation of SEQuence data (lite version)
prinseq-lite-examples - PReprocessing and INformation of SEQuence data
(example data)
Closes: 956384
Changes:
prinseq-lite (0.20.4-1) unstable; urgency=medium
.
* Initial release (Closes: #956384)
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