I think you should run Ray with a different value for
-read-write-checkpoints just to rule out bad checkpoints . Maybe your
checkpoints were
generated with a different number of ranks.
On 04/04/13 04:26 AM, Ino de Bruijn wrote:
> Hi,
>
> Hypothesis 0. I have 249,559,758 pairs in total so it would
Hello,
On 04/04/13 04:57 PM, Hung-Ying Lin wrote:
> Dear Dr. Boisvert,
I am not a doctor.
>
> Please allow me to introduce myself. I'm Hung-Ying, currently a PhD
> student in Genetics program at Iowa State University and I am conducting a
> project that compares
> performances among
Hi,
Hypothesis 0. I have 249,559,758 pairs in total so it would seem Ray is running
on one MPI rank.
Hypothesis 1. If I look at the SequencePartition.txt it seems the reads are
properly partitioned:
$ head -2 metassemble/assemblies/ray/out_41/SequencePartition.txt
#Rank FirstSequence Last
