On 03/11/11 09:30 AM, CJ wrote:
> Hi Seb,
>
> The following is my command setting:
>
> mpirun -np 8 \
> Ray \
> -k \
> 21 \
>-p \
> AR500.filter80_1.fastq \
> AR500.filter80_2.fastq \
> -p \
> AR2K.filter80_1.fastq \
> AR2K.filter80_2.fastq \
> -amos \
> -
On 02/11/11 05:23 PM, CJ wrote:
> Hi Seb,
>
>
Hi CJ,
> I have another question about the automatic detection of Distance& SD
> in the PE reads. I have two Libraries (500bp and 2K),
For the 500 bp, Ray is quite good at it.
For the 2K, Ray should be fine also.
> but in the
> LibraryStati
Hi Seb,
I have another question about the automatic detection of Distance & SD
in the PE reads. I have two Libraries (500bp and 2K), but in the
LibraryStatistics.txt file each Lib shows an AverageOuterDistance ~1K
with SD ~800. Is it because of the reads or sth else?
Is it better to manually set t
