Re: Use of GitHub Discussion

+1 fully agree that one place make it convenient and efficient. Thanks, Sudhakar. From: DImuthu Upeksha Date: Monday, September 2, 2024 at 9:29 AM To: dev@airavata.apache.org Subject: Re: Use of GitHub Discussion Hi Suresh, +1 for this. It is great for developers to stay on one platform for bo

Re: Architecture for Cybershuttle Orchestration App

Praneeth, We have an example in the SEAGrid electron client that you may want to look at. Please see the link from sharepoint below. Please let me know if you want a quick demo of this. https://indiana-my.sharepoint.com/:u:/r/personal/pamidigs_iu_edu/Documents/Projects/SEAGrid/SEAGrid_Client.d

Re: questions regarding dashboards to get quick statistics.

Saurav: While you are at it, Please do a pull request for the documentation as well. Thanks, Sudhakar. From: Lahiru Jayathilake Date: Sunday, June 4, 2023 at 11:53 AM To: saurav kumar jha Cc: dev@airavata.apache.org , sma...@apache.org , Abeysinghe, Eroma Subject: Re: questions regarding dash

Re: Priti Singh GSoC Proposal

Priti: You refer to a Form in the text. Please specify that it is a profile information form that user is required to fill. For some gateways this may be optional. The rest looks reasonable to me. Thanks, Sudhakar. From: Priti Singh Date: Tuesday, April 4, 2023 at 2:33 AM To: dev@airavata.

Re: Airawata MFT setup guide

Hi Uday: Did you try to follow the README.md at all? Thanks, Sudhakar. From: Uday Kumar Bommala Reply-To: "dev@airavata.apache.org" Date: Saturday, February 25, 2023 at 3:37 PM To: "dev@airavata.apache.org" Subject: Airawata MFT setup guide Hi Team, I am trying to setup Airawata MFT on my l

Re: [External] [DISCUSS] New name for MFT

Nauka Another one for carrying (good and people over water) networks Thanks, Sudhakar. From: Isuru Ranawaka Reply-To: "dev@airavata.apache.org" Date: Tuesday, January 31, 2023 at 5:43 PM To: "dev@airavata.apache.org" Subject: Re: [External] [DISCUSS] New name for MFT Great ideas.. few more a

Re: [DISCUSS] New name for MFT

How about Airavata-Hauler ( Data Hauler )moves data from one place to another like Elephant(Airavata) moves logs). Thanks, Sudhakar. From: Suresh Marru Reply-To: "dev@airavata.apache.org" Date: Monday, January 30, 2023 at 5:58 PM To: Airavata Dev Subject: [DISCUSS] New name for MFT Hi All,

Re: Regarding Pre and Post job commands in Airavata

Dimuthu: For gateway with specific applications the application or executable needs to be transferred along with the user inputs to the condor pool, which may require unpacking a tar ball or other mechanisms and identify the actual executable by a driver script. The driver script is the current

Re: SMILES Proto Schema

Bhavesh: When I tried to run java package I got this error. Do you know what could be missing? Thanks, Sudhakar. [INFO] Changes detected - recompiling the module! [INFO] Compiling 38 source files to /Users/spamidig/Library/Applications/smilesdb/airavata-sandbox/gsoc2022/smilesdb/Serv

Re: Regarding Airavata Seagrid Rich Client

to fix it. Thank you Aishwarya Sinhasane On Thu, Jul 28, 2022, 12:57 PM Pamidighantam, Sudhakar V mailto:spami...@illinois.edu>> wrote: Aishwarya: I am getting this error message when I try to load the JSMol Editor. Can this be addressed. Thanks, Sudhakar. npm start > electro

Re: Regarding Airavata Seagrid Rich Client

ldefense.com/v3/__https:/github.com/apache/airavata-sandbox/pull/83__;!!DZ3fjg!6dk7oQM3gRRFhxM9R-pq4Iv-7z1mJw4SdTXjpXj9PiV_umuOFJ4O64F2xveJrVIQq2V7iraP5cNASt2nzaRqQQiwC0o-Pg$> Thanks and Regards Aishwarya Sinhasane On Wed, 20 Jul 2022 at 15:33, Pamidighantam, Sudhakar V mailto:spami...@il

Re: Regarding Airavata Seagrid Rich Client

Aishwarya: Has a code been committed about this to git yet? Could you please point to the repo. Thanks, Sudhakar. From: Aishwarya Sinhasane Date: Tuesday, June 21, 2022 at 9:21 PM To: dev@airavata.apache.org Subject: Regarding Airavata Seagrid Rich Client Hello Everyone, I tried to make a lo

Re: Gaussian16 experiment failure.

Usually this happens when there is a network issue. Please retry with different compute resource if Expanse is not reachable for some reason. Thanks, Sudhakar. From: Bhavesh Asanabada Date: Wednesday, July 13, 2022 at 12:30 AM To: dev@airavata.apache.org Subject: Gaussian16 experiment failure.

Re: SSH access to the SEAGrid database.

Bhavesh: I could login into bhav...@gridchem.uits.iu.edu fine with my ssh key. Either your key is bad or something. Can you send me another ssh public key. Please send the output for ssh -vv bhav...@gridchem.uits.iu.edu

Re: Regarding seagrid desktop client molecule viewer inetgration

Aishwarya: Looks good. Keep this and then look at JS molecular Editors or third party editors such as Avagadro, or Ovito. Let us plan to meet next week to look at these and discuss further. Thanks, Sudhakar. From: Aishwarya Sinhasane Reply-To: "dev@airavata.apache.org" Date: Friday, July 1,

Re: Regarding Airavata Seagrid Rich Client

Access to local file system for enabling other local applications is important. Automatic download of outputs may not be needed as local disk may be small and user can download them as they see fit. Thanks, Sudhakar. From: Dinuka Desilva Reply-To: "dev@airavata.apache.org" Date: Wednesday, Ju

Re: SMILES Proto Schema

Bhavesh: 1. We need to pick a primary key. SMILES string could be a good one but is not absolutely needed to be. Also sometimes it is difficult to auto-generate SMILES strings for molecules. We can choose another one such as name but we need to consistently and uniquely use the name across

Re: Airavata Rich Client based on ElectronJS for GSoC 2022

Hi Aishwarya: Thanks for preparing the flow schematics architecture for the SEAGrid rich client.Could you please identify ElectronJS component classes and models based on the JavaFX for the architecture you presented. Thanks, Sudhakar. From: Aishwarya Sinhasane Reply-To: "dev@airavata.apache.

Re: Re : Airavata Rich Client based on ElectronJS for GSoC 2022

Apache Airavata updates the experiment status and the experiment API will have the status which will be used for the status. The output of the experiment will form the input and the post job workflow will stage these outputs back into gateway storage which will be used for the data catalog. Tha

Re: Airavata Rich Client based on ElectronJS for GSoC 2022

ElectronJS for GSoC 2022 Hello sudhakar Thank you for your response. As I have to submit proposal before Tuesday can we have a virtual meeting today if possible? That would be great help. Best regards Aishwarya Sinhasane On Fri, Apr 15, 2022, 1:49 PM Pamidighantam, Sudhakar mailto:pamid..

Re: Airavata Rich Client based on ElectronJS for GSoC 2022

Hi Aishwarya: I think we should meet and look at the SEAGrid rich client to get one view of the rich client and get some requirements. Please let us plan early next week to get this done. I just enabled you to get access to SEAGrid as well, FYI. Thanks, Sudhakar. From: Aishwarya Sinhasane Rep

Re: Django PyMol Output View

Hi Evan: In data.seagrid.org an implementation of glmol is available. I am interested in other molecular viewers like what you suggest. https://github.com/SciGaP/seagrid-data If you have any questions please let me know. Thanks, Sudhakar. From: Evan Palmer Reply-To: "dev@airavata.apache.org"

Re: Data Catalog into its own repo

+2. Thanks, Sudhakar. On 11/9/20, 9:37 AM, "Marru, Suresh" wrote: Hi All, Airavata Experiment catalog evolved over time and though the replica catalog and data product models are stand alone, they are buried to use them outside the experiment context. Any objections to refactor exp

Re: User storage

There are two entities, storage resource and storage path. Both need to be defined. Currently, Storage resource is in GATEWAY_DATA_STORE_RESOURCE_ID and the path is in GATEWAY_DATA_STORE_DIR Also see GATEWAY_DATA_STORE_HOSTNAME and FILE_UPLOAD_TEMP_DIR Which may be used in certain operations

Re: Archiving Airavata PHP Gateway Repository

+1 for archiving read-only. Thanks, Sudhakar. From: Suresh Marru Reply-To: "dev@airavata.apache.org" Date: Saturday, May 30, 2020 at 2:51 PM To: Airavata Dev Subject: Archiving Airavata PHP Gateway Repository Hi All, Since all active development is on Airavata Django Portal, any objections t

Re: [External] Re: How to generate the structured js:es6 client stub for airavata api

Not sure if it could help to look at the SEAGrid desktop client. Thanks, Sudhakar. From: Isuru Ranawaka Reply-To: "us...@airavata.apache.org" Date: Monday, April 6, 2020 at 11:11 PM To: Airavata Users , "Christie, Marcus Aaron" Cc: Airavata Dev Subject: [External] Re: How to generate the st

Re: MFT and data access for running jobs

periodic synchronizations. I believe this is a good GSoC project if someone is willing to take on and I would like to act as a mentor. Dimuthu On Thu, Mar 26, 2020 at 12:47 PM Pamidighantam, Sudhakar mailto:pamid...@iu.edu>> wrote: I am not suggesting we mount any disk but potentially t

Re: MFT and data access for running jobs

ly focussing on handling the data transfer path not synching data between two endpoints at realtime. Thanks Dimuthu On Thu, Mar 26, 2020 at 12:29 PM Pamidighantam, Sudhakar mailto:pamid...@iu.edu>> wrote: Dimuthu: Yes, the working directory on remote HPC cluster. The workflow may look

Re: MFT and data access for running jobs

t 10:21 AM Pamidighantam, Sudhakar mailto:pamid...@iu.edu>> wrote: Dimuthu: When the MFT becomes available would there be a way to define the remote working directory as a device to provide access to the data there. You know this has been a long standing need for particularly long running jobs. Thanks, Sudhakar.

MFT and data access for running jobs

Dimuthu: When the MFT becomes available would there be a way to define the remote working directory as a device to provide access to the data there. You know this has been a long standing need for particularly long running jobs. Thanks, Sudhakar.

Re: cluster reservations metadata

Marcus: This is great. If we get reservations for all queues/partitions in a resource does it then require separate entries for each queue on the system or can a flag like “all” indicate it should be applied to all queues defined/available in the resource. Thanks, Sudhakar. From: "Christie, M

Remote Interactive Visualization on Airavata Gateways

Yesterday during the DELTA gateway call, the PIs wanted interactive visualization from resources such as Stampede2 on the gateway. Stampede2 provides a way to serve this via VNC https://portal.tacc.utexas.edu/user-guides/stampede2#vis-remote and I see some ways to provide VNC clients using Java

Re: 0.18 Release Planning

+1 for 0.18 release. Thanks, Sudhakar. From: Eroma Abeysinghe Reply-To: "dev@airavata.apache.org" Date: Monday, October 21, 2019 at 5:00 PM To: Airavata Dev Subject: Re: 0.18 Release Planning +1 On Mon, Oct 21, 2019 at 4:25 PM Christie, Marcus Aaron mailto:machr...@iu.edu>> wrote: +1 > On

Some Data requirements

Please see some data needs we are seeing in the current gateways. Some of these are handled but several require additional development, integration and operational changes. Specific use cases could/should be documented as well. This may not cover all unmet needs and other are encouraged to add

Re: Error installing Airavata+RabbitMQ+Zookeeper

Can you try a VM with more memory (not disk space) say 8GB or so. Thanks, Sudhakar. From: "Achanta, Sai Rohith" Reply-To: "dev@airavata.apache.org" Date: Monday, March 11, 2019 at 10:20 PM To: "dev@airavata.apache.org" Subject: Error installing Airavata+RabbitMQ+Zookeeper Hi team, I’m trying

Re: Metascheduler work

I thought Pankaj presented a way to implement MPI executions through mesos more recently. He may want to comment on this.. Thanks, Sudakar. From: Marlon Pierce Reply-To: Date: Monday, December 17, 2018 at 8:52 AM To: "dev@airavata.apache.org" Subject: Re: Metascheduler work Hi Dimuthu, This

Re: Unused modules

What is the estimated timeline for enforceable allocation management to be available in Airavata, 2019, 2020? Thanks, Sudhakar. From: DImuthu Upeksha Reply-To: "dev@airavata.apache.org" Date: Friday, November 30, 2018 at 8:30 AM To: "dev@airavata.apache.org" Subject: Re: Unused modules Hi Su

Re: User Defined Workflow Execution Framework

Yasas and Marcus: Please see below.. On Sep 20, 2018, at 12:15 AM, Yasas Gunarathne mailto:yasasgunarat...@gmail.com>> wrote: Hi Marcus, Thank you very much for the suggestion. In the beginning, I tried to use the current ExperimentModel to implement workflows since it has workflow related ch

Re: TenantProfile proposal

which SEAGrid reports usage use the same id (“seagrid”)? I’m wondering if we really need a per compute host settings for the usageReportingGatewayId or if this can just be set in one place for the gateway. Thanks, Marcus On Sep 12, 2018, at 6:16 PM, Pamidighantam, Sudhakar mailto:pamid...@

Re: TenantProfile proposal

Thanks Marcus: Questions • Where should usageReportingGatewayId go? Should this be set at the gateway level? Should this be overrideable by GroupResourceProfiles? The usage reporting is currently an XSEDE requirement to tract gateway user specific usage. The XSEDE gateway usage attributes consi

Re: registry-refactoring testing

Marcus: I can login and am already an admin.. I will try and test these. Thanks, Sudhakar. On Aug 13, 2018, at 2:26 PM, Christie, Marcus Aaron mailto:machr...@iu.edu>> wrote: Hi Dev, The registry-refactoring branch changes has been merged to the develop branch. We have a develop deployment th

Re: Securing GroupResourceProfiles

Aaron mailto:machr...@iu.edu>> wrote: Hi Sudhakar, On Jun 25, 2018, at 2:12 PM, Pamidighantam, Sudhakar mailto:pamid...@iu.edu>> wrote: when you say one can clone, this newly cloned profile will have a separate identity with no privileges available for the original as the user who

Re: Securing GroupResourceProfiles

Marcus: when you say one can clone, this newly cloned profile will have a separate identity with no privileges available for the original as the user who clones may not inherit those privileges, right?! If this is the case this should be OK. But we should make sure privileges such as allocati

Re: User Defined Workflow Execution Framework

. Or we can extend Helix api to support workflow cloning which is the cleaner and ideal way. However it might need some understanding of Helix code base and proper testing. So for the time-being, let's go with the first approach. Thanks Dimuthu On Sun, Jun 3, 2018 at 7:35 AM, Pamidig

Re: User Defined Workflow Execution Framework

Is there a chance to include workflow restarter (where it was stopped earlier) in the tasks. Thanks, Sudhakar. On Jun 2, 2018, at 11:52 PM, Yasas Gunarathne mailto:yasasgunarat...@gmail.com>> wrote: Hi Suresh and Dimuthu, Thank you very much for the clarifications and suggestions. Based on the

Re: Gsoc 2018 - Integration of the Nextcloud with Apache Airavata

Karan: SEAgrid rich client uses Keycloak authentication in general and should be same for file upload service. Currently it does not know anything about NextCloud.But you are working on it. Is there some thing specific you want to know. Thanks, Sudhakar. On May 23, 2018, at 12:34 PM, Kotabagi,

Re: Independent Study

Eldho: Thanks for the report. I think you should check the english and sentence construction carefully. Also the Memcached results are surprising. Perhaps some parameters need to be optimized here. What is the difference between server 1 and 2 that are used in the testing. Is the Redis now use

Re: [ANNOUNCE] Welcome Sachin Kariyattin as Airavata Committer

Welcome to Sachin. Congratulations. Sudhakar. From: Suresh Marru Sent: Friday, March 9, 2018 12:31 PM To: Airavata Dev Cc: Airavata Users Subject: [ANNOUNCE] Welcome Sachin Kariyattin as Airavata Committer Hi All, The Project Management Committee (PMC) f

Re: [ANNOUNCE] Welcome Sneha Tilak as Airavata Committer

Congrats and Welcome Sneha to the PMC. Sudhakar. From: Suresh Marru Sent: Thursday, March 8, 2018 10:52 AM To: Airavata Dev Cc: Airavata Users Subject: [ANNOUNCE] Welcome Sneha Tilak as Airavata Committer Hi All, The Project Management Committee (PMC) fo

Re: [ANNOUNCE] Welcome Dimuthu Upeksha as Airavata PMC member and committer

Congratulations and Welcome to PMC Dimuthu. Sudhakar. > On Mar 6, 2018, at 10:32 AM, Suresh Marru wrote: > > Hi All, > > The Project Management Committee (PMC) for Apache Airavata has asked Dimuthu > Upeksha to become a committer and PMC member based on his contributions to > the project. We

Re: Getting error while trying to clone experiment

rovide permission on a string? On Wed, Dec 27, 2017 at 2:39 PM, Pamidighantam, Sudhakar V mailto:spami...@illinois.edu>> wrote: Cloning requires access to the data (inputs etc) from the previous experiment for reuse that are usually at the service host. Perhaps the permissions may be the i

Re: Getting error while trying to clone experiment

Cloning requires access to the data (inputs etc) from the previous experiment for reuse that are usually at the service host. Perhaps the permissions may be the issue in your case. Sudhakar. On Dec 27, 2017, at 1:52 PM, Saurabh Agrawal mailto:agras...@umail.iu.edu>> wrote: Hi all, Got this exc

Re: Running Airavata in standalone mode

I believe these kind of error are seen many times if the deployment instructions are not followed. I think it is time to capture them and suggest actionable solutions or refer back to the deployment instructions. Thanks, Sudhakar. On Dec 8, 2017, at 7:40 AM, DImuthu Upeksha mailto:dimuthu.upeks

Re: Welcome Marcus Christie as Airavata PMC member

Congratulation to Marcus and welcome as PMC. Thanks, Sudhakar. > On Nov 17, 2017, at 2:11 PM, Suresh Marru wrote: > > Hi All, > > The Project Management Committee (PMC) for Apache Airavata has asked Marcus > Christie to become a PMC member based on his contributions to the project. We > are p

Re: Remove the default user and default gateway?

This only may make sense for test/training deployments and not in any production. But should be gotten rid of and replaced by insisting on the specification of a gateway instance and user and throwing if they are missing with pointers to where and how they need to be set. Sudhakar. > On Oct 2

Re: Gateway-specific maximum values for Nodes, CPU Cores and Wall Time Limit

Hi Sneha: I think it should be possible to define these limits for a group with in a gateway eventually for a finer control by the gateway admins. Hope these modification would be extended to groups when they become available. Thanks, Sudhakar. On Sep 29, 2017, at 6:33 PM, Sneha Tilak mailto:s

Re: Using Docker images to run Thrift

+1 any thing to reduce manual installation and corresponding issues would be welcome. There should be testing to ensure this went through correctly and suggest practical ways to correct any shortcomings. Thanks, Sudhakar. On Jun 7, 2017, at 3:02 PM, Christie, Marcus Aaron mailto:machr...@iu.edu

Re: Spark context diagrams

Apoorv: Can you create these diagrams with creately or some software and annotate them better. It is a bit difficult for old eyes to read them.. Thanks, Sudhakar. On May 26, 2017, at 11:25 AM, Apoorv Palkar mailto:apoorv_pal...@aol.com>> wrote: Hey I've been working on teh spark details and

Re: Refactor JIRA Component list

Could you name them devop_tools. Thanks, Sudhakar. On Aug 4, 2016, at 10:58 AM, Shameera Rathnayaka mailto:shameerai...@gmail.com>> wrote: Hi Amila, Thanks for your feedback, agree with your 1 and 2 thoughts, let's remove those two components. What I mean by dev-tools is Ansible deployment sc

Re: Airavata 0.16 Release Planning

None. +1 for the release. Thanks, Sudhakar. On Jun 3, 2016, at 6:55 AM, Suresh Marru mailto:sma...@apache.org>> wrote: I gated the release earlier but this task was long done. Any objections to move forward with 0.16 release? Suresh On Mar 30, 2016, at 2:53 PM, Suresh Marru mailto:sma...@apa

Re: Airavata 0.16 Release Planning

+1 Sudhakar. On Mar 28, 2016, at 10:20 AM, Shameera Rathnayaka mailto:shameerai...@gmail.com>> wrote: +1 On Mon, Mar 28, 2016 at 10:50 AM Suresh Marru mailto:sma...@apache.org>> wrote: Hi All, Before we go too far, how about we call a feature freeze and stat working on 0.16 release? Unless a

Re: [VOTE] Apache Airavata Release 0.15 - RC1

+1 for the Apache Airavata 0.15 release. Thanks, Sudhakar. On Dec 4, 2015, at 5:19 AM, Suresh Marru wrote: > Apache Airavata PMC is pleased to call for a vote on the following Apache > Airavata 0.15 release candidate artifacts: > > Detailed change log/release notes: > > https://git-wip-us.apa

Re: Airavata installation to submit a job in Mesos/Maraton cluster

Pankaj; is your mesos cluster registered in the PGA as computer resource. Is the hello world application catalog entries made. Can you do this in a PGA using the gw56 ( I assume you have admin privileges). If not somebody can do this for you. Thanks, Sudhakar. On Dec 5, 2015, at 1:26 PM, Pankaj

Re: Required field 'gatewayId' was not present!

Is it possible to provide a default gatewayID for a given hosted Airavata service to avoid this problem. Of course if somebody wants a define it a particular war then the default can be changed to what the gateway wants to set it to. Thanks, Sudhakar. On Nov 28, 2015, at 1:35 PM, Pankaj Saha m

Re: launching a job through Airavata to Mesos cluster

Pankaj: If mesos is a scheduler, perhaps Airavata could be enhanced to submit jobs to using mesos scheduler ( similar to slurm/pbs/lsf scheduler). Is this what you are referring to? Thanks, Sudhakar. On Oct 28, 2015, at 11:11 AM, Pierce, Marlon mailto:marpi...@iu.edu>> wrote: I’ll add: if sub

Re: GSoC Hangout Friday 9 am eastern

Dimuthu: Can I login and try this client and see how far I can go in submitting and retrieving jobs data. Can you setup some instructions for me to do this. Thanks, Sudhakar. On Aug 13, 2015, at 9:22 PM, DImuthu Upeksha mailto:dimuthu.upeks...@gmail.com>> wrote: Hi Suresh, Sure. I'll do. On

Re: chessisNumber?

...@gmail.com>> wrote: According to LSF xslt file, chassis name is specified as "#BSUB -m c". May be Lahiru can give more insight. Thanks.. Chathuri On Thu, Jun 18, 2015 at 9:16 AM, Pamidighantam, Sudhakar V mailto:spami...@illinois.edu>> wrote: I have not heard such a r

Re: chessisNumber?

I have not heard such a requirement in LSF. Can somebody explain how this is used. Sudhakar. On Jun 18, 2015, at 7:56 AM, Pierce, Marlon mailto:marpi...@iu.edu>> wrote: Is this chassis number? From: Chathuri Wimalasena mailto:kamalas...@gmail.com>> Reply-To: "dev@airavata.apache.org

Re: Gap Analysis between GridChem Middleware and Airavata

Supun and Dimuthu: Thanks very much for the very nice comparative analysis. This reminds me of the happy old days when we went about establishing this model. Also we need to see if we need to use a combined model (part GridChem middleware services and part Airavata) or to implement the require

Re: [GSoC] Hangout - Airavata and PGA Overview

8 CT is fine for me. Sudhakar. On May 28, 2015, at 7:05 AM, Suresh Marru mailto:sma...@apache.org>> wrote: Hi All, Will 9 am eastern time (6.30 pm IST) tomorrow (Friday 29th May) work for every one for a google hangout? After a brief overview of Airavata and PGA, lets all of us do hand-on tut

Re: Running an XBaya experiment issue (api - 0.15.0)

Shameera: Is there a plan to update XBaya anytime soon to make it compatible with Airavata server and update the document accordingly. Thanks, Sudhakar. On May 26, 2015, at 1:22 PM, Shameera Rathnayaka mailto:shameerai...@gmail.com>> wrote: Hi Mevan, With the latest improvements, XBaya is in o

Re: Register a remote computational resource steps

Suresh: I think we need to have a local deployment of this test PHP interface and instructions to use that instance. I will talk to Eroma about creating these in a document similar to XBAYA-Quick-Start tutorial. This way any body can deploy a local PHP instance, register resources and could

Re: Monitor jobs by JobName if JobId is null

If jobid is missing due to error job name will not work. Sudhakar. On Apr 24, 2015, at 12:32 PM, Shameera Rathnayaka wrote: > Hi all, > > There is a chance that we will not get jobId after we submit a job to a > compute resoruce. In that case we can use JobName to monitor the Job using > e

Re: [API] Assigning Computational Resources

; manage the users and group wide allocation. > > Suresh > >> On Apr 19, 2015, at 11:53 AM, Pamidighantam, Sudhakar V >> wrote: >> >> Well it definitely depends on the allocation available. The (user) project >> allocation should not be 0 or negative

Re: [API] Assigning Computational Resources

according to Eroma's clarification, it does not > depend on high level project management. > > Thanks, > Dimuthu > > On Sun, Apr 19, 2015 at 6:21 PM, Pamidighantam, Sudhakar V > wrote: > Just to clarify further, there are two kinds of projects … one is a research >

Re: [API] Assigning Computational Resources

Just to clarify further, there are two kinds of projects … one is a research project under which many experiments can be collected. On the organization of users side, there may be a project under which many users can be grouped lead by a PI ( principal investigator). Perhaps this distinction sho

Re: [jira] [Commented] (AIRAVATA-1635) [GSoC] Integrate Airavata Java Client SDK with GridChem Client

this use case to Airavata, we don't have to change the file at > client side. Only requirement is to pass this file to Airavata through its > API. Am I correct? > > On Fri, Mar 27, 2015 at 5:23 PM, Pamidighantam, Sudhakar V > wrote: > Dimuthu: > This is a standard forma

Re: [jira] [Commented] (AIRAVATA-1635) [GSoC] Integrate Airavata Java Client SDK with GridChem Client

Dimuthu: This is a standard format for an application named Gaussian. This file is parsed for various job requirements at the middleware and resource stages for proper job submission. There are several applications each of which have their own standard ways of setting the job parameters. Also th

Re: [jira] [Commented] (AIRAVATA-1635) [GSoC] Integrate Airavata Java Client SDK with GridChem Client

Suresh: Could you please add Dimuthu under project ID 596 using “ add new user “ function under Management menu in the consult portal www.gridchem.org/consult. Thanks, Sudhakar. On Mar 26, 2015, at 11:16 AM, Dimuthu Upeksha (JIRA) wrote: > >[ > https://issues.apache.org/jira/browse/AIRA

Re: Saving the content of the STDOUT and STDERR to database

If the STDOUT becomes large it is not good to store in a database table. Perhaps the data base can contain a pointer(URI) to the file. Sudhakar. On Jan 9, 2015, at 5:01 PM, Chathuri Wimalasena mailto:kamalas...@gmail.com>> wrote: Hi All, At the moment, we are saving the content of the STDOUT

Re: [VOTE] Apache Airavata release 0.14 - RC1

bitmq.client.impl.AMQChannel.handleFrame(AMQChannel.java:91) at com.rabbitmq.client.impl.AMQConnection$MainLoop.run(AMQConnection.java:550) ... 1 more On Dec 22, 2014, at 4:50 PM, Pamidighantam, Sudhakar V mailto:spami...@illinois.edu>> wrote: Followed the instruction in the Quick-Start tutorial and

Re: [VOTE] Apache Airavata release 0.14 - RC1

Followed the instruction in the Quick-Start tutorial and every thing works fine. +1 for the next part pf the process. Thanks, Sudhakar. On Dec 22, 2014, at 3:17 PM, Marlon Pierce mailto:marpi...@iu.edu>> wrote: Let's keep this vote thread open for 72 more hours unless there are objections. Mar

Re: DataCat Project Progress

and test the parsers by your self. On Thu, Dec 11, 2014 at 7:42 PM, Pamidighantam, Sudhakar V mailto:spami...@illinois.edu>> wrote: Supun: I support these goals. I am available for you to engage with you and anything I can do to expedite the project please let me know. Even if you think I ca

Re: DataCat Project Progress

Supun: I support these goals. I am available for you to engage with you and anything I can do to expedite the project please let me know. Even if you think I can not, do please ask anyway. I have written the original parsers in perl myself and have directed others when the Cup/JFLex system was

Re: Improvements to Experiment input data model in order to support Gaussian application

We can not expect users or applications to change behavior for Airavata. It is up to us enable applications and users as they are now. As you have seen several applications have system input parameters inside a master input file and they are used by the application and required to be used in sch

Re: Improvements to Experiment input data model in order to support Gaussian application

, Sudhakar. On Dec 8, 2014, at 10:23 AM, Marlon Pierce wrote: > The more examples, the better. I'd like to find the right balance between > understanding the problem space and making incremental progress. > > Marlon > > On 12/8/14, 10:38 AM, Pamidighantam, Sudha

Re: Improvements to Experiment input data model in order to support Gaussian application

Chaturi: Thanks for these suggestions. One question I have is whether we should look at some of the input files in the set of applications currently under testing to come up with these requirements. There may be additional requirements in some of the inputs. Of course we can incrementally update

Re: [sgg-l] XBaya Quick Start Tutorial is in Airavata wiki

ue. Thanks, Shameera. On Mon, Dec 1, 2014 at 12:59 PM, Pamidighantam, Sudhakar V mailto:spami...@illinois.edu>> wrote: Begin forwarded message: From: Marlon Pierce mailto:marpi...@iu.edu>> Subject: Re: [sgg-l] XBaya Quick Start Tutorial is in Airavata wiki Date: December 1, 2014 at 10:14:

Fwd: [sgg-l] XBaya Quick Start Tutorial is in Airavata wiki

is to dev@airavata. Looks like * Some services (derby) were not properly shutdown from a previous test, and/or * Not all services were started correctly (zookeeper) Marlon On 12/1/14, 11:05 AM, Pamidighantam, Sudhakar V wrote: The version was from just before break. I get the following error

Re: access to wiki

you have problems. > > Marlon > > On 11/24/14, 3:14 PM, Pamidighantam, Sudhakar V wrote: >> Yes. it is pamidigs. >> >> Thanks, >> Sudhakar. >> On Nov 24, 2014, at 1:53 PM, Marlon Pierce wrote: >> >>> Hi Sudhakar, did you create a wiki a

Re: access to wiki

n > > On 11/24/14, 3:14 PM, Pamidighantam, Sudhakar V wrote: >> Yes. it is pamidigs. >> >> Thanks, >> Sudhakar. >> On Nov 24, 2014, at 1:53 PM, Marlon Pierce wrote: >> >>> Hi Sudhakar, did you create a wiki account? Please send me y

Re: access to wiki

Yes. it is pamidigs. Thanks, Sudhakar. On Nov 24, 2014, at 1:53 PM, Marlon Pierce wrote: > Hi Sudhakar, did you create a wiki account? Please send me your username and > I'll give you the required permissions. > > Thanks-- > > Marlon > > On 11/24/14, 2:41

access to wiki

I would like to deposit some scripts toward generalization in app catalog and gfac design/implementation and would need access to the wiki. Please let me know when this is ready. Thanks, Sudhakar.

Re: 0.14 Release Dates

I volunteer to test the documentation before the release to harden it. Thanks, Sudhakar. On Nov 24, 2014, at 12:34 PM, Suresh Marru wrote: > Hi All, > > I briefly verified the current master on Friday but I ran into an issue with > XBaya (but I suspect it has to do something with my laptop),

RE: Separate Thrift services- Code restructure

I am starting to look at Airavata with a background of having used an old snapshot in paramchem project. Is there a place I can go to learn the current organization of the development. Thanks, Sudhakar. From: Shameera Rathnayaka [mailto:shameerai...@gmail.com] Sent: Tuesday, October 28, 2014 3:5

[jira] [Commented] (AIRAVATA-465) ability to interact with outputs from individual tasks while executing

[ https://issues.apache.org/jira/browse/AIRAVATA-465?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14080260#comment-14080260 ] Pamidighantam, Sudhakar V commented on AIRAVATA-465: I will be