cTAKES - Smoking Status

2015-05-06 Thread Bohne, Jacqueline R
We are trying to implement the Smoking Status pipeline at our site. We have it up and running, but we're finding that "TOBACCO: NONE" is being incorrectly classified as a CURRENT_SMOKER. I looked at the documentation and it appears that the SentenceAdjuster should be handling this situation?

Re: CTAKES mirroring on github.

2015-05-06 Thread Steven Bethard
Yes, I ping this issue every couple months, but no luck so far. (They take a look each time I ask, but haven't yet pushed a working git mirror for us.) Steve On Tue, May 5, 2015 at 12:09 PM, Kim Ebert wrote: > Ah, looks like the issue is still being looked into. > > https://issues.apache.org/jir

RE: build tool suggestion

2015-05-06 Thread Masanz, James J.
I was suggesting it only for the Jenkins build, so that people who might not want it as part of their own builds won't see it. But to catch people who might not have their own warning individually defined or who miss it in the warnings of their own build. -Original Message- From: Kim

Re: build tool suggestion

2015-05-06 Thread Kim Ebert
Would this only be for the Jenkins build? I would prefer not to have this as part of the regular Maven build. On Tue, May 5, 2015 at 6:00 PM, Masanz, James J. wrote: > > Do you know offhand, would it be easy to have something run at build time > that flags uses of FileReader? > > Related - do w

RE: build tool suggestion

2015-05-06 Thread Finan, Sean
I understood that. I check warnings before checkin. You can do a search for something like https://wiki.jenkins-ci.org/display/JENKINS/Warnings+Plugin -Original Message- From: Masanz, James J. [mailto:masanz.ja...@mayo.edu] Sent: Wednesday, May 06, 2015 10:58 AM To: 'dev@ctakes.apache.

RE: build tool suggestion

2015-05-06 Thread Masanz, James J.
Sorry, I wasn't clear, when I said "at build time", I meant the Jenkins automated build. -Original Message- From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] Sent: Wednesday, May 06, 2015 9:52 AM To: dev@ctakes.apache.org Subject: RE: build tool suggestion Your IDE should h

Re: build tool suggestion

2015-05-06 Thread Britt Fitch
There is a Sonar plugin for Jenkins that's pretty rad. Sent from my iPhone > On May 6, 2015, at 10:57 AM, Masanz, James J. wrote: > > > Sorry, I wasn't clear, when I said "at build time", I meant the Jenkins > automated build. > > > -Original Message- > From: Finan, Sean [mailto:s

RE: build tool suggestion

2015-05-06 Thread Finan, Sean
Your IDE should have settings that allow custom warnings. Also check out findbugs -- http://en.wikipedia.org/wiki/FindBugs There might be a configurable maven plugin. It is a process ... -Original Message- From: Masanz, James J. [mailto:masanz.ja...@mayo.edu] Sent: Tuesday, May 05,

RE: svn commit: r1677903 - in /ctakes/trunk/ctakes-dictionary-lookup-fast/src/main/java/org/apache/ctakes/dictionary/lookup2: concept/BsvConceptFactory.java dictionary/BsvRareWordDictionary.java util/

2015-05-06 Thread Finan, Sean
We could, but GetAsStream does not do as complete a search as locateFile. GetAsStream would not be able to find the resource that was being used at the time (deepphe custom bsv). getAsStream can be improved - maybe a jira? -Original Message- From: Chen, Pei [mailto:pei.c...@childrens.