RE: Authentication failure - crossposted

Quite welcome, glad that it worked! -Original Message- From: William Dailey [mailto:wdai...@gvmh.org] Sent: Wednesday, July 08, 2015 8:51 PM To: dev@ctakes.apache.org Subject: Re: Authentication failure - crossposted Thanks.. I put them on separate lines as separate set commands. Worked

Re: Authentication failure - crossposted

Thanks.. I put them on separate lines as separate set commands. Worked like a charm. Now onto my next step, figuring out what I get and how to only get what I want. Help deeply appreciated. Bill William R. Dailey, MD, MS, MSMI Physician/Chief of Medical Information Golden Valley Memorial

RE: dictionary-look-fast fails to handle alternative CUIs

Hi Britt, You’ve got it exactly. I actually started working on this right before a meeting right before I left work right before I went to the store … but I’m now back to it and I’m going to move forward with the tiny bot that I’ve got. I don’t think that it will take too long … One reason t

RE: Authentication failure - crossposted

About the comma: What I mean is, it thinks that your username is: docdailey, ctakes.umlspw= and that your password is the out-of-box placeholder "CHANGEME" -Original Message- From: William Dailey [mailto:wdai...@gvmh.org] Sent: Wednesday, July 08, 2015 5:52 PM To: dev@ctakes.apache.org

RE: Authentication failure - crossposted

Try getting rid of the comma -Original Message- From: William Dailey [mailto:wdai...@gvmh.org] Sent: Wednesday, July 08, 2015 5:52 PM To: dev@ctakes.apache.org Subject: RE: Authentication failure - crossposted redacted means i edited out my password... set with: set ctakes.umlsuser=do

RE: Authentication failure - crossposted

redacted means i edited out my password... set with: set ctakes.umlsuser=docdailey, ctakes.umlspw= set CURRENT_DIR=%cd% replaces my password "with CHANGEME" is part of the actual error -Original Message- From: "Finan, Sean" To: "dev@ctakes.apache.org" Date: Wed, 8 Jul 2015 21:40:

RE: Authentication failure - crossposted

Hi, Is ", ctakes.umlsp w=redacted with CHANGEME " something that you wrote to hide your password on this email? If so, that is fine, it is just a little odd. If not, then can you double-check how your password is set when you run? -Original Message- From: William Dailey [mailto:wdai

Authentication failure - crossposted

ctakes 3.2.2 Trying to check my ctakes install. When I run runctakesCVD and try to load AE I get the following error: 08 Jul 2015 16:09:10 ERROR UmlsUserApprover - UMLS Account at https://uts-ws.n lm.nih.gov/restful/isValidUMLSUser is not valid for user docdailey, ctakes.umlsp w=redacted w

Re: dictionary-look-fast fails to handle alternative CUIs

Thanks for the details Sean. I had assumed the conversion to Long was related to sort/search efficiency but that makes sense. I had been thinking of something similar with parsing out the non-numerals and converting them to 2-digit numeral values. i.e. “a” = 01, “z” = 26. Ultimately CN123456 wo

RE: dictionary-look-fast fails to handle alternative CUIs

By the way, in case you are wondering why it does this … the umls database that we use has roughly half a million cuis. Storing cuis in the various tables as longs takes up a lot less space than storing them as 8 character strings. From: britt fitch [mailto:britt.fi...@wiredinformatics.com] Sen

RE: dictionary-look-fast fails to handle alternative CUIs

Hi Britt, This did come up briefly wrt NCI custom cuis, but there was no urgency so it got shoved onto a back burner. I’m glad that you brought it up again as it is something that I’ve been wanting to enhance. My thought at the moment is to change CuiCodeUtil (…lookup2.util.) from a non-insta

dictionary-look-fast fails to handle alternative CUIs

This is largely directed to Sean but open to other feedback as well. The current fast lookup using a BSV parses the first field as “C” and up to 7 numerals, padding with “0" as needed to reach that length when applicable [see CuiCodeUtil.getCuiCode(String)] The CUI string is then substring’d fr