Hi!
I'm trying to set up YTEX using the ant.bat script but are getting errors.
The log-file says:
A:\Program\apache-ctakes-3.2.2\bin\ctakes-ytex\scripts>java -cp
A:\Program\apache-ctakes-3.2.2\lib\ant-1.9.2.jar;A:\Program\apache-ctakes-3.2.2\lib\ant-launcher-1.9.2.jar;A:\Program\apache-ctakes-3.2
How / when can we go about getting started on this?
From: "Chen, Pei"
To: "dev@ctakes.apache.org" ; Ted Strall
Sent: Friday, July 24, 2015 12:52 PM
Subject: RE: Combining Knowledge- and Data-driven Methods for
De-identification of Clinical Narratives
Ted- Welcome to the community!
Sounds great
On Thu, Jul 30, 2015 at 7:21 AM, Ted Strall
wrote:
> How / when can we go about getting started on this?
> From: "Chen, Pei"
> To: "dev@ctakes.apache.org" ; Ted Strall
>
> Sent: Friday, July 24, 2015 12:52 PM
> Subject: RE: Combining Knowledge- and Data-driven Methods f
Hi Ted/Jay,
Thanks for suggesting and taking this up….
What information will be needed to accomplish what you were thinking?
Just thinking aloud here:
1) Test data. I think John Green crafted about 20-30 notes in the data
folder. We can use this as a starting point.
2) Code to run th
[+dev]
Hi Azad,
This is great news! Looking forward to it.
--Pei
On Thu, Jul 30, 2015 at 8:16 AM, Azad Dehghan wrote:
> Hi Pei,
>
> Just to keep you in the loop: I am currently tailoring a version of the
> de-id tool for The Christie NHS Foundation Trust (UK)--this is due to be
> concluded end o
Hello Oranit,
Did you have any success solving this issue? If so, could you share how you
resolved it?
I am running into the same issue using cTAKES 3.2.2, and have carefully
followed the instructions in
https://cwiki.apache.org/confluence/display/CTAKES/YTEX+Installation
numerous time as well t
Justin,
Is this still an issue for you? I believe there was a known issue and
someone submitted a patch:
https://issues.apache.org/jira/browse/CTAKES-370?jql=component%20%3D%20ctakes-smoking-status%20AND%20project%20%3D%20CTAKES%20AND%20resolution%20%3D%20Unresolved%20ORDER%20BY%20priority%20DESC
Tomasz,
IIRC, the code in SubjectCleartkAnalysisEngine.java should have the
feature extractors used- I believe there is an ENUM of a preset of
features, but do not recall exactly which one was the best performing
for test set- probably best to check the source code.
I think adding the plain senten
Thanks Pei,
I will test out if it works following the instruction. I will make a
report.
Justin
On Thu, Jul 30, 2015 at 4:02 PM, Pei Chen wrote:
> Justin,
> Is this still an issue for you? I believe there was a known issue and
> someone submitted a patch:
>
> https://issues.apache.org/jira/br
Hello,
I have searched to find some information about processing document with
analysis engines in scripting pipeline, such as shell script.
I am wondering if there are formal document for pipeline building by
scripting language, such as shell, python, perl. In the pipeline, ctakes
specific analy
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