Hi Sean,
It took a while to figure out how to setup everything and run tests, but I
have now successfully generated CUI files containing the terms that were
missing before.
Thanks for your help.
Andrew
*Andrew Phillips*
GitHub: github.com/skeledrew
LinkedIn: www.linkedin.com/in/aphillipstech
Hi Raga,
The topic of grabbing data from a db has come up several times within the last
six months or so. There are some classes in ctakes-core cr/ that deal with
databases, but they are not documented and do require configuration for
site-specific schema.
Is anybody out there familiar with t
Hey Tim,
I have recently been testing with the "smoker" notes in ctakes-examples-res,
and using your new sentence detector (Lumpy) has definitely been the way to go
for those notes. They have the random cr/lf within sentences. It is great
that we have some example notes in ctakes that can sho
Good morning,
I am attempting to use cTakes for some NLP analysis on a corpus of clinical
nursing progress notes. Currently I am only looking to use the core NLP
pipeline. My data is in a MySQL database, do you have any documentation on
using cTakes with MySQL or similar databases?
Thank you
B
Hi Tim,
Good point, but I happen to be using the ctakes-core sentence detector.
Dima
> On Jun 23, 2017, at 06:31, Miller, Timothy
> wrote:
>
> Something I just thought of is that if you are using the new (beta) sentence
> detector trained on Mimic, it is a bit of a "lumper" rather than a
Hi Sean,
First of all, thank you Sean, Steve, and Tim for giving this a thought. I
definitely agree that the problem lies in this line:
List sents = new ArrayList<>(JCasUtil.selectCovering(jCas,
Sentence.class, entityOrEventMention.getBegin(),
entityOrEventMention.getEnd()));
The negation AE
Hi Dima,
Have you had a chance to play with the proposed solutions? If not then let us
know and somebody will eventually get to it.
Meanwhile, would you mind submitting a tar on jira?
Thanks,
Sean
-Original Message-
From: Dligach, Dmitriy [mailto:ddlig...@luc.edu]
Sent: Wednesday, June
