Exporting YTEX Pipeline

2014-07-30 Thread Clayton Turner
Hi, I'm trying to export the data I get from running the pipeline through the Collection Processing Engine. I set up the pipeline where I have a directory where all the XML is output to, but I am having issues at this point. I've tried using the built in Exporter from the Data Mining section on

Re: Exporting YTEX Pipeline

2014-07-30 Thread vijay garla
Can you try this: copy https://code.google.com/p/ytex/source/browse/trunk/workspace/examples/fracture/cui/export.template.xml to CTAKES_HOME\desc\ctakes-ytex\fracture\cui.xml replace %DB_SCHEMA% with your database schema name (value of db.schema in your ytex.properties file) Then from a command

Re: Exporting YTEX Pipeline

2014-07-30 Thread Clayton Turner
Awesome!! It worked! The only things I had to change (since I'm on Windows) was flipping the slashes when necessary and removing the first slash when specifying the -Dlog4j.configuration=file:/... Thank you so much for putting up with my issues -Clayton On Wed, Jul 30, 2014 at 2:48 PM, vijay

Re: Exporting YTEX Pipeline

2014-07-30 Thread vijay garla
Great that it worked! Note that the examples for fracture (bag of words/bag of cuis) is just scratching the surface of feature representations - there are a gazillion ways to export the document (bag of words per section, include negation status, ...) Doing this via SQL makes it super easy