I'm starting a new thread for this topic since it seems unrelated to the one you replied to.
Check BagOfCuisGenerator, here's what it looks like in trunk: http://svn.apache.org/repos/asf/ctakes/trunk/ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/runtime/BagOfCUIsGenerator.java this code will read in an input directory with text files in it and output directory, and it will write a file for every input file containing a list of the CUIs found in that file. Fair warning it is a bit out of date since it uses the pipeline with the old dictionary which is a bit slower. If that is not exactly what you need the code should still be good as an example of how to grab CUIs from a processed CAS. We are working on ways of streamlining this further. Thanks Tim On 03/27/2015 12:00 PM, Yingcheng Sun wrote: > Dear all, > > Do you know how to generate CUIs by programming, not using GUI. > It will be better if you can show me the code. > > Thank you! > > Yingcheng >
