Re: Scaling cTakes

2014-12-09 Thread Miller, Timothy
rom the notes. > > Sean > > From: Geise, Brandon D. [bdge...@geisinger.edu] > Sent: Tuesday, December 09, 2014 9:13 AM > To: dev@ctakes.apache.org > Subject: RE: Scaling cTakes > > Thanks again Sean for the advice. Just by changing the pipeline to use the > fa

RE: Scaling cTakes

2014-12-09 Thread Finan, Sean
Sean From: Geise, Brandon D. [bdge...@geisinger.edu] Sent: Tuesday, December 09, 2014 9:13 AM To: dev@ctakes.apache.org Subject: RE: Scaling cTakes Thanks again Sean for the advice. Just by changing the pipeline to use the fast dictionary led to quadrupling the processing speed.

RE: Scaling cTakes

2014-12-09 Thread Geise, Brandon D.
...@childrens.harvard.edu] Sent: Friday, December 05, 2014 1:14 PM To: dev@ctakes.apache.org Subject: RE: Scaling cTakes Hi Brandon, It sounds like you've got a decent pipeline set up. To increase the speed you could try swapping out use of ctakes-dictionary-lookup with ctakes-dictionary-lookup-fast in t

RE: Scaling cTakes

2014-12-05 Thread Geise, Brandon D.
Thanks Jay, I'll have to take a look at this too. -Original Message- From: jay vyas [mailto:jayunit100.apa...@gmail.com] Sent: Friday, December 05, 2014 2:40 PM To: dev@ctakes.apache.org Subject: Re: Scaling cTakes on a tangential note, we do have example of running ctakes

Re: Scaling cTakes

2014-12-05 Thread jay vyas
.@childrens.harvard.edu] > Sent: Friday, December 05, 2014 1:14 PM > To: dev@ctakes.apache.org > Subject: RE: Scaling cTakes > > Hi Brandon, > > It sounds like you've got a decent pipeline set up. To increase the > speed you could try swapping out use of ctakes-dict

RE: Scaling cTakes

2014-12-05 Thread Geise, Brandon D.
Thanks Sean. I'll take a look and see if this speeds the pipeline up. Thanks, Brandon -Original Message- From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] Sent: Friday, December 05, 2014 1:14 PM To: dev@ctakes.apache.org Subject: RE: Scaling cTakes Hi Brandon, It s

RE: Scaling cTakes

2014-12-05 Thread Savova, Guergana
PM To: dev@ctakes.apache.org Subject: RE: Scaling cTakes Hi Brandon, It sounds like you've got a decent pipeline set up. To increase the speed you could try swapping out use of ctakes-dictionary-lookup with ctakes-dictionary-lookup-fast in the AE. Check ctakes-clinical-pipeline/des

RE: Scaling cTakes

2014-12-05 Thread Finan, Sean
Hi Brandon, It sounds like you've got a decent pipeline set up. To increase the speed you could try swapping out use of ctakes-dictionary-lookup with ctakes-dictionary-lookup-fast in the AE. Check ctakes-clinical-pipeline/desc/[ae]/AggregatePlaintextFastUMLSProcessor.xml for an example. As