t shouldn't have a build error.
>
> Sean
>
> -Original Message-
> From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Tuesday, November 21, 2017 5:26 AM
> To: dev@ctakes.apache.org
> Subject: Re: source code of user installation of cTakes. [EXTERNAL]
>
;r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=p8r3qe3ZhAJ2sfB9BKxtO6xgHUdUk0WWaB2A57OEJLs&s=pRJ81R6rCn_PT5H7O4cV9lSE4CMegjcRUNKIPNkqZZo&e=
> Piper+File+Submitter+GUI
>
> Sean
>
> -Original Message-
> From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Mon
wiki, pointing to your piper file, etc.
>
> https://cwiki.apache.org/confluence/display/CTAKES/
> Piper+File+Submitter+GUI
>
> Sean
>
> -Original Message-
> From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Monday, November 20, 2017 7:12 AM
> To: de
gt; 4. run maven compile
>
> The compilation stage should start, and near the end the piper gui will
> pop up.
>
> Sean
>
> -Original Message-----
> From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Friday, November 17, 2017 1:29 AM
> To: dev@ctakes.apach
gt;
> -Original Message-
> From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Friday, November 17, 2017 1:29 AM
> To: dev@ctakes.apache.org
> Subject: Re: source code of user installation of cTakes. [EXTERNAL]
> [SUSPICIOUS] [SUSPICIOUS]
>
> Hi Sean,
>
&g
e, which means that you don't have to
> both with the long package and copy process.
>
>
> Sean
>
>
> -Original Message-
> From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Thursday, November 16, 2017 4:17 AM
> To: dev@ctakes.apache.org
> Sub
...@gmail.com]
Sent: Friday, November 17, 2017 1:29 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL]
[SUSPICIOUS] [SUSPICIOUS]
Hi Sean,
I am using Eclipse Mars IDE.
Could you please tell me how to to set up an ide to run directly using the
h the
> long package and copy process.
>
>
> Sean
>
>
> -Original Message-
> From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Thursday, November 16, 2017 4:17 AM
> To: dev@ctakes.apache.org
> Subject: Re: source code of user installation of cTakes. [EX
ailto:bhagwat.pos...@gmail.com]
> Sent: Wednesday, November 15, 2017 11:20 AM
> To: dev@ctakes.apache.org
> Subject: RE: source code of user installation of cTakes. [EXTERNAL]
> [SUSPICIOUS] [SUSPICIOUS]
>
> Hi Sean,
>
> Unfortunately I haven't received it in
y, November 15, 2017 11:20 AM
> To: dev@ctakes.apache.org
> Subject: RE: source code of user installation of cTakes. [EXTERNAL]
> [SUSPICIOUS] [SUSPICIOUS]
>
> Hi Sean,
>
> Unfortunately I haven't received it in spam folder too.
>
> On Nov 15, 2017 7:47 PM, "Finan
I just sent it 2 more times ...
-Original Message-
From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
Sent: Wednesday, November 15, 2017 11:20 AM
To: dev@ctakes.apache.org
Subject: RE: source code of user installation of cTakes. [EXTERNAL]
[SUSPICIOUS] [SUSPICIOUS]
Hi Sean
gt;
>
> -Original Message-
> From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Wednesday, November 15, 2017 8:27 AM
> To: dev@ctakes.apache.org
> Subject: Re: source code of user installation of cTakes. [EXTERNAL]
> [SUSPICIOUS] [SUSPICIOUS]
>
> H
.com]
> Sent: Wednesday, November 15, 2017 6:49 AM
> To: dev@ctakes.apache.org
> Subject: Re: source code of user installation of cTakes. [EXTERNAL]
> [SUSPICIOUS] [SUSPICIOUS]
>
> Thank You Sean and Tim for such a useful information.
>
> Now I don't see any error logged
very different from what you get from a release version. Some things
> > move very quickly in ctakes (and some very slowly). If you are
> > willing to build the code then I always recommend using trunk -
> > sometimes because I just plain forget what the previous release was
trunk. You can decide whether or
not to make the upgrade.
Sean
-Original Message-
From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
Sent: Wednesday, November 15, 2017 6:49 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL]
[SUSPICIOUS
-Original Message-
> From: Miller, Timothy [mailto:timothy.mil...@childrens.harvard.edu]
> Sent: Tuesday, November 14, 2017 7:09 AM
> To: dev@ctakes.apache.org
> Subject: Re: source code of user installation of cTakes. [EXTERNAL]
> [SUSPICIOUS] [SUSPICIOUS]
>
> Hi Bhagwat,
>
>
Miller, Timothy [mailto:timothy.mil...@childrens.harvard.edu]
Sent: Tuesday, November 14, 2017 7:09 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL]
[SUSPICIOUS] [SUSPICIOUS]
Hi Bhagwat,
That error comes from the tlink module, but **it should be poss
S x-ray”.
Sean
From: Bhagwat Posane
[mailto:bhagwat.pos...@gmail.com<mailto:bhagwat.pos...@gmail.com>]
Sent: Monday, November 13, 2017 3:25 AM
To: dev@ctakes.apache.org<mailto:dev@ctakes.apache.org>
Subject: Re: source code of user installation of cTakes. [EXTERNAL] [SUSPICIOUS]
Hello S
gwat Posane [mailto:bhagwat.pos...@gmail.com]
> Sent: Monday, November 13, 2017 3:25 AM
> To: dev@ctakes.apache.org
> Subject: Re: source code of user installation of cTakes. [EXTERNAL]
> [SUSPICIOUS]
>
> Hello Sean,
>
> Thank you for the inputs, I have successfully created HTML
the right panel “CONTAINS x-ray”.
Sean
From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
Sent: Monday, November 13, 2017 3:25 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL] [SUSPICIOUS]
Hello Sean,
Thank you for the inputs, I have
t; reader TextReader files=D:/Bhagwat/data.txt
> >
> > After that any of your specifications for writing xmi files should work.
> > One clarification: "writeXmis" does not have an asterisk. You
> > probably added one for my benefit.
> >
> > Sean
> >
> >
[mailto:bhagwat.pos...@gmail.com]
Sent: Friday, November 10, 2017 6:13 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL] [SUSPICIOUS]
Hello Sean,
Thank you so much, the things you have given works well for me; I could
generate the .xmi output file using
> set minimumSpan=2
> > load DictionarySubPipe
> >
> > // Cleartk Entity Attributes (negation, uncertainty, etc.) load
> > AttributeCleartkSubPipe
> >
> > // Entity Relations (degree/severity, anatomical location) load
> > RelationSubPipe
> >
> > // Tem
an
-Original Message-
From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
Sent: Thursday, November 09, 2017 9:06 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL] [SUSPICIOUS]
Hello Sean,
Thank you very much for such a valuable inputs. W
anatomical location)
> load RelationSubPipe
>
> // Temporal (event, time, dtr, tlink)
> load TemporalSubPipe
>
> // Coreferences (e.g. patient = he)
> load CorefSubPipe
>
> // Html output
> add pretty.html.HtmlTextWriter
>
> // XMI output
> writeXmis
> ////////////
> ////////////////
>
rtain, etc.?
> This would require multiple components, but most of them should run in the
> temporal pipeline.
>
> Tim
>
> From: Bhagwat Posane
> Sent: Wednesday, November 8, 2017 2:40 AM
> To: dev@ctakes.apache.org
> Subject: Re:
equire multiple components, but most of them should run in the
temporal pipeline.
Tim
From: Bhagwat Posane
Sent: Wednesday, November 8, 2017 2:40 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL] [SUSPICIOUS]
--
From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu]
Sent: Wednesday, November 08, 2017 8:09 AM
To: dev@ctakes.apache.org
Subject: RE: source code of user installation of cTakes. [EXTERNAL]
[SUSPICIOUS] [SUSPICIOUS]
Hi Bhagwat,
The ctakes-temporal module has the components needed to ge
TextWriter
// XMI output
writeXmis
///
Sean
-Original Message-
From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
Sent: Wednesday, November 08, 2017 2:41 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL] [SUSPICIOUS]
ctakes/nlp and see if it helps. Cheers.
> >
> > Regards,
> > Gandhi
> >
> >
> > -----Original Message-
> > From: Bhagwat Posane [mailto:bhagwat.pos...@gmail.com]
> > Sent: Friday, November 03, 2017 7:39 PM
> > To: dev@ctakes.apache.org
> >
@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL] [SUSPICIOUS]
Thanks Gandhi,
I have gone through both the links and able to get the results.
I am interested in finding the context of clinical notes like if any procedure
is happened or not.
I think TLINKS
all AEs
> are described ...
> > calling all community ... but I think that most are.
> >
> > Sean
> >
> >
> > -Original Message-
> > From: Miller, Timothy [mailto:timothy.mil...@childrens.harvard.edu]
> > Sent: Monday, October 30, 2017 9:4
ode for that bit of the pipeline. Not all AEs are
> described ...
> calling all community ... but I think that most are.
>
> Sean
>
>
> -Original Message-
> From: Miller, Timothy [mailto:timothy.mil...@childrens.harvard.edu]
> Sent: Monday, October 30, 2017 9
alling all community ... but I think that most are.
>
> Sean
>
>
> -Original Message-
> From: Miller, Timothy [mailto:timothy.mil...@childrens.harvard.edu]
> Sent: Monday, October 30, 2017 9:48 AM
> To: dev@ctakes.apache.org
> Subject: Re: source code of user ins
Sean
-Original Message-
From: Miller, Timothy [mailto:timothy.mil...@childrens.harvard.edu]
Sent: Monday, October 30, 2017 9:48 AM
To: dev@ctakes.apache.org
Subject: Re: source code of user installation of cTakes. [EXTERNAL] [SUSPICIOUS]
cTAKES is based on Apache UIMA, which is a pipeline-b
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