Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-23 Thread Masoud Rouhizadeh
From: Masoud Rouhizadeh Sent: Thursday, July 18, 2019 12:27:41 PM To: dev@ctakes.apache.org Subject: Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL] Thanks, everyone, for their great feedback. Very helpful insigh

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-19 Thread Finan, Sean
From: Lingren, Todd Sent: Friday, July 19, 2019 10:27 AM To: dev@ctakes.apache.org Subject: Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL] Hi Masoud, The replacement was the same within a note, but not standardized across the complete record for a patient. Date shifting was also wit

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-19 Thread Lingren, Todd
ev@ctakes.apache.org Subject: Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL] Thanks, everyone, for their great feedback. Very helpful insights! Here are a few comments and questions: (1) Peter: great paper! I agree that replacing the same real person’s name by the same pseudonym make

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-18 Thread Masoud Rouhizadeh
ent: Wednesday, July 17, 2019 1:12:21 PM To: dev@ctakes.apache.org Subject: Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL] My group has done considerable work on de-identification and on synthesizing pseudonymous data to replace the original PHI with plausible but

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-17 Thread gandhi rajan
; If you can get ctakes-scrubber working in your project then it would be > >> pretty easy to create an engine that does nothing except replace such > >> generic tags with random names, dates, institutions, etc. > >> > >> Sean > >> __

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-17 Thread Lingren, Todd
org Subject: Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL] My group has done considerable work on de-identification and on synthesizing pseudonymous data to replace the original PHI with plausible but inauthentic data (sometimes confusingly called re-identification). One conclusion

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-17 Thread Peter Szolovits
d be > pretty easy to create an engine that does nothing except replace such generic > tags with random names, dates, institutions, etc. > > Sean > > From: gandhi rajan mailto:gandhiraja...@gmail.com>> > Sent: Wednesday, July 17,

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-17 Thread Ravi Tejwani
u can get ctakes-scrubber working in your project then it would be >> pretty easy to create an engine that does nothing except replace such >> generic tags with random names, dates, institutions, etc. >> >> Sean >> ________________ >> From

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-17 Thread gandhi rajan
gt; > From: gandhi rajan > Sent: Wednesday, July 17, 2019 12:26 PM > To: dev@ctakes.apache.org > Subject: Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL] > > Hi Masoud, we had a similar requirement to identify patient

Re: Synthetic replacement feature in cTAKES Scrubber [EXTERNAL]

2019-07-17 Thread Finan, Sean
your project then it would be pretty easy to create an engine that does nothing except replace such generic tags with random names, dates, institutions, etc. Sean From: gandhi rajan Sent: Wednesday, July 17, 2019 12:26 PM To: dev@ctakes.apache.org Subject

Re: Synthetic replacement feature in cTAKES Scrubber

2019-07-17 Thread gandhi rajan
Hi Masoud, we had a similar requirement to identify patient names in the narratives text and I had a discussion with Sean Finan on patient name identification feature in cTAKES. What he told at that point in time was cTAKES dint supported patient name identification feature. Also as far as I know,

Synthetic replacement feature in cTAKES Scrubber

2019-07-17 Thread Masoud Rouhizadeh
Dear cTAKES developer, This is Masoud Rouhizadeh from JHU. I'm leading the NLP effort at the Institute for Clinical and Translational Research and work on enterprise-level NLP projects at Johns Hopkins Medicine. One of the major goals we are targeting is de-identification of a large number of no