[jira] [Updated] (UIMA-6283) Annotation relation predicates

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6283?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Richard Eckart de Castilho updated UIMA-6283: - Description: * (/) Introduce a set of annotation relation predicate like {

[jira] [Resolved] (UIMA-6283) Annotation relation predicates

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6283?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Richard Eckart de Castilho resolved UIMA-6283. -- Resolution: Fixed > Annotation relation predicates > ---

[jira] [Created] (UIMA-6288) selectPreceding using zero-width anchor returns covering annotation

2020-11-03 Thread Richard Eckart de Castilho (Jira)
Richard Eckart de Castilho created UIMA-6288: Summary: selectPreceding using zero-width anchor returns covering annotation Key: UIMA-6288 URL: https://issues.apache.org/jira/browse/UIMA-6288

[jira] [Work started] (UIMA-6288) selectPreceding using zero-width anchor returns covering annotation

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6288?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Work on UIMA-6288 started by Richard Eckart de Castilho. > selectPreceding using zero-width anchor returns coverin

[jira] [Updated] (UIMA-6288) selectPreceding using zero-width anchor returns covering annotation

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6288?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Richard Eckart de Castilho updated UIMA-6288: - Fix Version/s: 2.6.0uimaFIT > selectPreceding using zero-width anchor retu

[GitHub] [uima-uimaj] reckart merged pull request #79: [UIMA-6287] FSArray.spliterator fails to handle pear case

2020-11-03 Thread GitBox
reckart merged pull request #79: URL: https://github.com/apache/uima-uimaj/pull/79 This is an automated message from the Apache Git Service. To respond to the message, please log on to GitHub and use the URL above to go to t

[GitHub] [uima-uimafit] reckart opened a new pull request #131: [UIMA-6286] select following finds zero-width annotation at reference end position

2020-11-03 Thread GitBox
reckart opened a new pull request #131: URL: https://github.com/apache/uima-uimafit/pull/131 - Added fix and unit test **JIRA Ticket:** https://issues.apache.org/jira/browse/UIMA-6286 This is an automated message f

[GitHub] [uima-uimaj] reckart opened a new pull request #79: [UIMA-6287] FSArray.spliterator fails to handle pear case

2020-11-03 Thread GitBox
reckart opened a new pull request #79: URL: https://github.com/apache/uima-uimaj/pull/79 - Added unit test for the issue that the spliterator is returning the wrong type - Added unit test for the issue that the toArray is returning the wrong type - Refactored other JCas classloading t

[jira] [Created] (UIMA-6289) SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument

2020-11-03 Thread Mario Juric (Jira)
Mario Juric created UIMA-6289: - Summary: SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument Key: UIMA-6289 URL: https://issues.apache.org/jira/browse/UIMA-6289 Proj

[GitHub] [uima-uimaj] reckart merged pull request #73: [UIMA-6283] Annotation relation predicates

2020-11-03 Thread GitBox
reckart merged pull request #73: URL: https://github.com/apache/uima-uimaj/pull/73 This is an automated message from the Apache Git Service. To respond to the message, please log on to GitHub and use the URL above to go to t

[jira] [Commented] (UIMA-6289) SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument

2020-11-03 Thread Mario Juric (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6289?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17225423#comment-17225423 ] Mario Juric commented on UIMA-6289: --- It seems to be related to the use of uimaFIT, since

[GitHub] [uima-uimafit] reckart opened a new pull request #132: [UIMA-6288] select preceding using zero width anchor returns covering annotation

2020-11-03 Thread GitBox
reckart opened a new pull request #132: URL: https://github.com/apache/uima-uimafit/pull/132 - Added fix and unit test **JIRA Ticket:** https://issues.apache.org/jira/browse/UIMA-6288 This is an automated message f

[GitHub] [uima-uimafit] reckart merged pull request #131: [UIMA-6286] select following finds zero-width annotation at reference end position

2020-11-03 Thread GitBox
reckart merged pull request #131: URL: https://github.com/apache/uima-uimafit/pull/131 This is an automated message from the Apache Git Service. To respond to the message, please log on to GitHub and use the URL above to go

[GitHub] [uima-uimafit] reckart merged pull request #132: [UIMA-6288] select preceding using zero width anchor returns covering annotation

2020-11-03 Thread GitBox
reckart merged pull request #132: URL: https://github.com/apache/uima-uimafit/pull/132 This is an automated message from the Apache Git Service. To respond to the message, please log on to GitHub and use the URL above to go

[jira] [Resolved] (UIMA-6288) selectPreceding using zero-width anchor returns covering annotation

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6288?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Richard Eckart de Castilho resolved UIMA-6288. -- Resolution: Fixed > selectPreceding using zero-width anchor returns cove

[jira] [Commented] (UIMA-6289) SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6289?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17225470#comment-17225470 ] Richard Eckart de Castilho commented on UIMA-6289: -- I can reproduce the i

[jira] [Commented] (UIMA-6289) SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6289?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17225485#comment-17225485 ] Richard Eckart de Castilho commented on UIMA-6289: -- On a more stripped do

[jira] [Comment Edited] (UIMA-6289) SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6289?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17225485#comment-17225485 ] Richard Eckart de Castilho edited comment on UIMA-6289 at 11/3/20, 3:30 PM:

[jira] [Created] (UIMA-6290) Clean up AnnotationIteratorTest

2020-11-03 Thread Richard Eckart de Castilho (Jira)
Richard Eckart de Castilho created UIMA-6290: Summary: Clean up AnnotationIteratorTest Key: UIMA-6290 URL: https://issues.apache.org/jira/browse/UIMA-6290 Project: UIMA Issue Type

[GitHub] [uima-uimaj] reckart opened a new pull request #80: [UIMA-6290] Clean up AnnotationIteratorTest

2020-11-03 Thread GitBox
reckart opened a new pull request #80: URL: https://github.com/apache/uima-uimaj/pull/80 - Cleaning up the AnnotationIteratorTest - Removing empty test class SelectTest This is an automated message from the Apache Git Serv

[GitHub] [uima-uimaj] reckart opened a new pull request #81: [UIMA-6289] SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument

2020-11-03 Thread GitBox
reckart opened a new pull request #81: URL: https://github.com/apache/uima-uimaj/pull/81 - Fixed issue that relevant annotations might be skipped if they occur before the boundary annotation in the index - Fixed issue that the boundary annotation might be in the result list although it

[jira] [Commented] (UIMA-6289) SelectFS.coveredBy not selecting annotations with exact same bounds as annotation argument

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6289?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17225633#comment-17225633 ] Richard Eckart de Castilho commented on UIMA-6289: -- [~mjuric] We have a P

[jira] [Created] (UIMA-6291) Improve uimaFIT benchmarking module

2020-11-03 Thread Richard Eckart de Castilho (Jira)
Richard Eckart de Castilho created UIMA-6291: Summary: Improve uimaFIT benchmarking module Key: UIMA-6291 URL: https://issues.apache.org/jira/browse/UIMA-6291 Project: UIMA Issue

[jira] [Reopened] (UIMA-6270) Add selectOverlapping to (J)CasUtil

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6270?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Richard Eckart de Castilho reopened UIMA-6270: -- The signature without the (J)Cas as the first argument is missing. > Add se

[GitHub] [uima-uimafit] reckart opened a new pull request #133: [UIMA-6270] Add selectOverlapping to (J)CasUtil

2020-11-03 Thread GitBox
reckart opened a new pull request #133: URL: https://github.com/apache/uima-uimafit/pull/133 - Added missing signature for selectOverlapping **JIRA Ticket:** https://issues.apache.org/jira/browse/UIMA-6270 This is

[jira] [Created] (UIMA-6292) selectCovering is slow

2020-11-03 Thread Richard Eckart de Castilho (Jira)
Richard Eckart de Castilho created UIMA-6292: Summary: selectCovering is slow Key: UIMA-6292 URL: https://issues.apache.org/jira/browse/UIMA-6292 Project: UIMA Issue Type: Bug

[GitHub] [uima-uimafit] reckart opened a new pull request #134: [UIMA-6292] selectCovering is slow

2020-11-03 Thread GitBox
reckart opened a new pull request #134: URL: https://github.com/apache/uima-uimafit/pull/134 - Avoid repeatedly calling ts.subsumes by obtaining a properly-typed index in the first place. **JIRA Ticket:** https://issues.apache.org/jira/browse/UIMA-6292 -

[GitHub] [uima-uimafit] reckart opened a new pull request #135: [UIMA-6292] selectCovering is slow

2020-11-03 Thread GitBox
reckart opened a new pull request #135: URL: https://github.com/apache/uima-uimafit/pull/135 - Avoid repeatedly calling ts.subsumes by obtaining a properly-typed index in the first place. (cherry picked from commit 4e59bb39570996fc67f10cdcf73f52befca9c399) **JIRA Ticket:** htt

[GitHub] [uima-uimafit] reckart merged pull request #133: [UIMA-6270] Add selectOverlapping to (J)CasUtil

2020-11-03 Thread GitBox
reckart merged pull request #133: URL: https://github.com/apache/uima-uimafit/pull/133 This is an automated message from the Apache Git Service. To respond to the message, please log on to GitHub and use the URL above to go

[jira] [Resolved] (UIMA-6270) Add selectOverlapping to (J)CasUtil

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6270?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Richard Eckart de Castilho resolved UIMA-6270. -- Resolution: Fixed > Add selectOverlapping to (J)CasUtil > --

[GitHub] [uima-uimafit] reckart opened a new pull request #136: [UIMA-6291] Improve uimaFIT benchmarking module

2020-11-03 Thread GitBox
reckart opened a new pull request #136: URL: https://github.com/apache/uima-uimafit/pull/136 - Added support for benchmark groups - Avoid re-building the CAS for every single benchmark to make benchmarks in a group more comparable - Provide informative summaries for groups **JI

[GitHub] [uima-uimafit] reckart merged pull request #134: [UIMA-6292] selectCovering is slow

2020-11-03 Thread GitBox
reckart merged pull request #134: URL: https://github.com/apache/uima-uimafit/pull/134 This is an automated message from the Apache Git Service. To respond to the message, please log on to GitHub and use the URL above to go

[jira] [Reopened] (UIMA-6270) Add selectOverlapping to (J)CasUtil

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6270?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Richard Eckart de Castilho reopened UIMA-6270: -- Switch to using annotation predicates form uimaj-core. > Add selectOverlapp

[GitHub] [uima-uimafit] reckart opened a new pull request #137: [UIMA-6270] Add selectOverlapping to (J)CasUtil

2020-11-03 Thread GitBox
reckart opened a new pull request #137: URL: https://github.com/apache/uima-uimafit/pull/137 - Drop AnnotationPredicates again from uimaFIT and instead use the one meanwhile provided in uimaj-core - Updated various unit tests to check for alignment of uimaFIT with the annotation predica

[GitHub] [uima-uimafit] reckart merged pull request #135: [UIMA-6292] selectCovering is slow

2020-11-03 Thread GitBox
reckart merged pull request #135: URL: https://github.com/apache/uima-uimafit/pull/135 This is an automated message from the Apache Git Service. To respond to the message, please log on to GitHub and use the URL above to go

[jira] [Resolved] (UIMA-6292) selectCovering is slow

2020-11-03 Thread Richard Eckart de Castilho (Jira)
[ https://issues.apache.org/jira/browse/UIMA-6292?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Richard Eckart de Castilho resolved UIMA-6292. -- Resolution: Fixed > selectCovering is slow > -- > >