Re: [OMPI devel] Multi-rail on openib

2009-06-12 Thread Nifty Tom Mitchell
On Tue, Jun 09, 2009 at 04:33:51PM +0300, Pavel Shamis (Pasha) wrote: > >> Open MPI currently needs to have connected fabrics, but maybe that's >> something we will like to change in the future, having two separate >> rails. (Btw Pasha, will your current work enable this ?) > I do not completel

Re: [OMPI devel] Enabling debugging and profiling in openMPI (make "CFLAGS=-pg -g")

2009-06-12 Thread Ralph Castain
The firewall should already be solved. Basically, you have to define a set of ports in your firewall that will let TCP messages pass through, and then tell OMPI to use those ports for both the TCP BTL and the OOB. "ompi_info --params btl tcp" - will tell you the right param to set for the T

Re: [OMPI devel] Hang in collectives involving shared memory

2009-06-12 Thread Eugene Loh
Sylvain Jeaugey wrote: Hi Ralph, I managed to have a deadlock after a whole night, but not the same you have : after a quick analysis, process 0 seems to be blocked in the very first send through shared memory. Still maybe a bug, but not the same as yours IMO. Yes, that's the one Terry and

Re: [OMPI devel] Enabling debugging and profiling in openMPI (make "CFLAGS=-pg -g")

2009-06-12 Thread Leo P.
Thank you Ralph and Samuel. Sorry for the complete newbie question. The reason that i wanted to study openMPI is because i wanted to make open MPI support nodes that are behind NAT or firewall. If you guys could give me some pointers on how to go about doing this i would appreciate alot. I am

Re: [OMPI devel] Hang in collectives involving shared memory

2009-06-12 Thread Sylvain Jeaugey
Hi Ralph, I managed to have a deadlock after a whole night, but not the same you have : after a quick analysis, process 0 seems to be blocked in the very first send through shared memory. Still maybe a bug, but not the same as yours IMO. I also figured out that libnuma support was not in my

Re: [OMPI devel] Enabling debugging and profiling in openMPI (make "CFLAGS=-pg -g")

2009-06-12 Thread Ralph Castain
If you do a "./configure --help" you will get a complete list of the configure options. You may want to turn on more things than just enable-debug, though that is the critical first step. On Jun 12, 2009, at 8:31 AM, Samuel K. Gutierrez wrote: Hi, Let me begin by stating that I'm at most

Re: [OMPI devel] Enabling debugging and profiling in openMPI (make "CFLAGS=-pg -g")

2009-06-12 Thread Samuel K. Gutierrez
Hi, Let me begin by stating that I'm at most an Open MPI novice - but you may want to try the addition of the --enable-debug configure option. That is, for example: ./configure --enable-debug; make Hope this helps. Samuel K. Gutierrez On Jun 12, 2009, at 3:27 AM, Leo P. wrote: Hi ever

[OMPI devel] Enabling debugging and profiling in openMPI (make "CFLAGS=-pg -g")

2009-06-12 Thread Leo P.
Hi everyone, I am trying to understand the openMPI code so was trying to enable debug and profiling by issusing $ make "CFLAGS=-pg -g" But i am getting this error. libtool: link: ( cd ".libs" && rm -f "mca_paffinity_linux.la" && ln -s "../mca_paffinity_linux.la" "mca_paffinity_linux.la" ) ma