Re: [OMPI devel] [GE users] OpenMPI 1.2 integration and dedicated MPI networks

2006-11-02 Thread Orion Poplawski
Pak Lui wrote: Orion Poplawski wrote: In our setup (which I don't believe is very unique) the nodes are connected by two networks: an "admin" network which allows for connections from outside the cluster and an "MPI" network that is a private GigE network connecting the nodes for MPI traff

Re: [OMPI devel] [GE users] OpenMPI 1.2 integration and dedicated MPI networks

2006-10-20 Thread Pak Lui
Hi Orion, I wonder if you can try this: use the PE_HOSTFILE that is generated by the qsh -pe my_pe for tight integration, so the host names may be the ones without the "x". But then in your mpirun command, specify the interfaces you would like to exclude, e.g. all except for the gigE interfac

Re: [OMPI devel] [GE users] OpenMPI 1.2 integration and dedicated MPI networks

2006-10-20 Thread Orion Poplawski
Pak Lui wrote: Hi Orion and Reuti, Let me see if I can understand the issue by breaking them down first: (1) First, I am curious to know why you would need to create a PE_HOSTFILE yourself, because that file is generated by SGE/N1GE when you specify you are running a parallel job under SGE/N1

Re: [OMPI devel] [GE users] OpenMPI 1.2 integration and dedicated MPI networks

2006-10-20 Thread Pak Lui
Hi Orion and Reuti, Let me see if I can understand the issue by breaking them down first: (1) First, I am curious to know why you would need to create a PE_HOSTFILE yourself, because that file is generated by SGE/N1GE when you specify you are running a parallel job under SGE/N1GE, by doing so

Re: [OMPI devel] [GE users] OpenMPI 1.2 integration and dedicated MPI networks

2006-10-20 Thread Orion Poplawski
Reuti wrote: Hi, Am 20.10.2006 um 01:08 schrieb Orion Poplawski: I'm starting to test out OpenMPI 1.2 tight integration with SGE and have run into the following issue. Currently, my startmpi script massages the hostnames in the machines file created from the SGE pe_hostfile add an "x" suffi