[OMPI devel] MPI_Cart_coords_f segv with Intel compiler

2012-05-24 Thread TERRY DONTJE
I am seeing several Cart Fortran tests (like MPI_Cart_coords_f) segv in opal_memory_ptmalloc2_int_free when OMPI trunk is compiled with icc 12.1.0 for 64 bit on linux. Just wondering if anyone has seen anything similar to this with a different version of icc. Other non-Intel compilers seem t

[OMPI devel] SVN trunk PSM MTL is busted

2012-05-24 Thread Jeff Squyres
Per Brian's recent MTL updates, the PSM MTL is busted. I notice the following when I run on a machine that has the PSM software stack installed: [ompi_r00lez:19108] mca: base: component_find: unable to open /scratch/local/jsquyres/bogus/lib/openmpi/mca_mtl_psm: /scratch/local/jsquyres/bogus/li

Re: [OMPI devel] [EXTERNAL] SVN trunk PSM MTL is busted

2012-05-24 Thread Barrett, Brian W
On 5/24/12 8:55 AM, "Jeff Squyres" wrote: >Per Brian's recent MTL updates, the PSM MTL is busted. I notice the >following when I run on a machine that has the PSM software stack >installed: > >[ompi_r00lez:19108] mca: base: component_find: unable to open >/scratch/local/jsquyres/bogus/lib/openmp

Re: [OMPI devel] [EXTERNAL] SVN trunk PSM MTL is busted

2012-05-24 Thread Jeff Squyres
On May 24, 2012, at 12:07 PM, Barrett, Brian W wrote: >> I'll file a bug about this; I'm assuming this is an issue the 1.7 RMs >> will care about. > > Did you file a bug? Ralph fixed this one and I fixed its sister in probe, > so all should work now... Yep -- Ralph closed it. Thanks! -- Jef

Re: [OMPI devel] MPI_Cart_coords_f segv with Intel compiler

2012-05-24 Thread Larry Baker
Terry, What you are seeing is a bug in the vectorizer in the Intel 2011.6.233 release. We've talked about this before. You should probably remove that compiler from your system(s). I think the new release of OpenMPI describes this problem, but does not stop if from occurring. I write a patc

Re: [OMPI devel] MPI_Cart_coords_f segv with Intel compiler

2012-05-24 Thread TERRY DONTJE
Actually, I don't think the below is the issue. I think the OMPI_ARRAY_INT_2_LOGICAL macro is doing a free on line 193 when it shouldn't because the OMPI_ARRAY_LOGICAL_2_INT macro calling an empty OMPI_ARRAY_LOGICAL__2_INT_ALLOC macro which in the other case that macro actually does a malloc.

Re: [OMPI devel] MPI_Cart_coords_f segv with Intel compiler

2012-05-24 Thread TERRY DONTJE
Forgot to add the date of my compiler was 2011.10.11 so I wonder if it might not have this issue you mentioned below. Anyways, I'll keep the below in mind as I try to run more tests. thanks, --td On 5/24/2012 2:06 PM, Larry Baker wrote: Terry, What you are seeing is a bug in the vectorizer

[OMPI devel] Fwd: [Open MPI] #3108: Affinity still busted in v1.6

2012-05-24 Thread Jeff Squyres
FYI. I think I have fixes ready, but I am bummed that we didn't fix the whole paffinity mess properly in 1.6. :-( Begin forwarded message: > From: Open MPI > Subject: [Open MPI] #3108: Affinity still busted in v1.6 > Date: May 24, 2012 2:59:42 PM EDT > Cc: > > #3108: Affinity still busted i

Re: [OMPI devel] MPI_Cart_coords_f segv with Intel compiler

2012-05-24 Thread Jeff Squyres
FWIW, I think we imported your patch a while ago. Here it is on the trunk: https://svn.open-mpi.org/trac/ompi/browser/trunk/opal/mca/memory/linux/malloc.c#L3933 And here it is on v1.6: https://svn.open-mpi.org/trac/ompi/browser/branches/v1.6/opal/mca/memory/linux/malloc.c#L3933 On May 24, 20

Re: [OMPI devel] MPI_Cart_coords_f segv with Intel compiler

2012-05-24 Thread Larry Baker
Dang! You're absolutely right! Mea culpa. Thanks, Larry Baker US Geological Survey 650-329-5608 ba...@usgs.gov On 24 May 2012, at 1:19 PM, Jeff Squyres wrote: > FWIW, I think we imported your patch a while ago. Here it is on the trunk: > > https://svn.open-mpi.org/trac/ompi/browser/trunk/