Re: bio parser

2012-12-16 Thread Simen Kjaeraas
On 2012-09-16 17:12, bioinfornatics wrote: Dear, I wrote a fasta format parser and fastq format parser. These parser used MmFile and do not load all file these will save memory. Fastq http://dpaste.dzfl.pl/9b23574d Fasta http://dpaste.dzfl.pl/228dba11 The way to iterate over it is really cl

bio parser

2012-12-16 Thread bioinfornatics
Dear, I wrote a fasta format parser and fastq format parser. These parser used MmFile and do not load all file these will save memory. Fastq http://dpaste.dzfl.pl/9b23574d Fasta http://dpaste.dzfl.pl/228dba11 The way to iterate over it is really close and i search a way to have one struct bySecti