Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci In directory sc8-pr-cvs17.sourceforge.net:/tmp/cvs-serv3368
Modified Files: coot.info Log Message: cleaned up info file and have latest version Index: coot.info =================================================================== RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/coot.info,v retrieving revision 1.86 retrieving revision 1.87 diff -u -d -r1.86 -r1.87 --- coot.info 10 Sep 2008 08:14:02 -0000 1.86 +++ coot.info 10 Sep 2008 15:30:14 -0000 1.87 @@ -1,10 +1,10 @@ Package: coot -Version: 0.5-pre-1-1382 -Revision: 2 +Version: 0.5-pre-1-1391 +Revision: 1 GCC: 4.0 -Source: http://www.ysbl.york.ac.uk/~emsley/software/pre-release/coot-0.5-pre-1-revision-1382.tar.gz +Source: http://www.ysbl.york.ac.uk/~emsley/software/pre-release/coot-0.5-pre-1-revision-1391.tar.gz # Source: http://www.ysbl.york.ac.uk/~emsley/software/%n-%v.tar.gz -Source-MD5: bf54db93380c1e2d23515fa4ea46cf4f +Source-MD5: fed9229e285e3ede30f7d3f9798e4d11 SourceDirectory: %n-0.5-pre-1 Source2: http://www.ysbl.york.ac.uk/refmac/data/refmac5.4_dictionary.tar.gz Source2-MD5: 14b965dc5ab9762c819f632c133998b9 @@ -20,8 +20,9 @@ widgets (with the gui builder glade), mmdb, clipper, and OpenGL, together with a new approach to map contouring and importing/creation and other (modelling) operations. The mmdb, clipper, ssm and mccp4 libraries are now -provided in the ccp4-onlylibs-dev fink package. On-line documentation is -available from the coot Web site (see below) and is updated regularly. +provided in separate fink packages that replace the ccp4-onlylibs-dev fink +package. On-line documentation is available from the coot Web via the help +menu or via the web site (see below) and is updated regularly. . To have an Aqua-like Coot gtk+2 environment, issue the following command: echo "include \"%p/share/themes/Glossy_P/gtk-2.0/gtkrc\"">~/.gtkrc-2.0 @@ -130,26 +131,15 @@ # Patch: %n.patch PatchScript: << #!/bin/zsh -exf -if [[ $(sw_vers -productVersion) < 10.5 ]]; then - : -else - : - # patch -p1 < %a/%n-10.5.patch -fi perl -pi.bak -e 's|use-modules \(goosh\)|use-modules \(goosh goosh\)|g' scheme/coot-utils.scm -#perl -pi.bak -e 's/include <malloc.h>//g' **/*.c # Use the correct povray directory perl -pi.bak -e 's|povray-3.5|povray-3.6|g' scheme/povray.scm # Use "open" to display the png snapshot in Preview.app (or the user's default application) perl -pi.bak -e 's|coot-png-display-program \"display\"|coot-png-display-program \"open\"|g' scheme/raster3d.scm # This is required to get the map displayed on both sides of side-by-side stereo echo "(set-display-lists-for-maps 0)" >>| scheme/group-settings.scm -# Fix configure to work with gpp4 library instead of ccp4c -# perl -pi -e 's|ccp4c|gpp4|g' configure -#perl -pi.bak -e 's|2.8.0|2.6.0|g' configure -# perl -pi.bak -e 's|have_glut=no|have_glut=yes|g' configure +# Hopefully temporary hacks to configure perl -pi.bak -e 's|have_goosh=no|have_goosh=yes|g' configure -# perl -pi.bak -e 's|have_guile_gui=no|have_guile_gui=yes|g' configure perl -pi -e "s|guile-config|guile-1.8-config|g" configure perl -pi -e 's|\(goosh\)|\(goosh goosh\)|g' configure perl -pi -e 's|lccp4c|lgpp4|g' configure @@ -157,19 +147,15 @@ << ############################################################################### ConfigureParams: << ---with-gpp4=%p --with-mmdb=%p \ ---with-clipper-prefix=%p \ ---with-fftw=%p \ ---with-glut-prefix=%p --with-gl-prefix=/usr/X11R6 --with-gtk2 \ ---with-gnomecanvas-prefix=%p --with-ssmlib-prefix=%p \ ---with-imlib-prefix=%p --with-gtkgl-prefix=%p --with-glib-prefix=%p \ ---with-guile-gtk --with-guile-gtk-prefix=%p \ +--with-gpp4=%p --with-mmdb=%p --with-ssmlib-prefix=%p --with-clipper-prefix=%p \ +--with-fftw=%p --with-gnomecanvas-prefix=%p --with-gtk2 --with-glut-prefix=%p \ +--with-guile-gtk --with-guile-gtk-prefix=%p --with-gl-prefix=/usr/X11R6 \ +--with-imlib-prefix=%p --with-gtkgl-prefix=%p --with-glib-prefix=%p \ --with-gsl-prefix=%p --with-guile --with-python << ############################################################################### CompileScript: << #!/bin/zsh -efv -# set -x export PATH=%p/bin:%p/share/guile/1.8/scripts/binoverride:$PATH:%p/share/guile/1.8/goosh export SED=/usr/bin/sed export GDK_USE_XFT='1' @@ -184,12 +170,12 @@ DYLD_LIBRARY_PATH="" \ ./configure %c # +# Force coot to link to single-precision fftw libraries. The double-precision libraries +# cause coot to crash. perl -pi -e 's|lrfftw |lsrfftw |g' **/Makefile perl -pi -e 's|lfftw |lsfftw |g' **/Makefile perl -pi -e 's|include <rfftw.h>|include <srfftw.h>|g' surface/CXXFFTSolventMap.h # -# py_path="%p/bin/python2.5" \ -# #remake the src/coot_wrap_python.cc and src/coot_wrap_guile.cc files /bin/rm -f **/coot_wrap_**.cc cd src @@ -226,7 +212,6 @@ # This installs the refmac monomer library mkdir -p %i/share/coot/lib/data cp -R ../dic %i/share/coot/lib/data/monomers -# cp %i/share/coot/etc/python/coot.py %i/share/coot/python/. # Reference structures should be in %i/share/coot/reference-structures cp -R ../reference-structures %i/share/coot/. cp -R * %i/share/coot/etc/. @@ -256,34 +241,34 @@ lib/libcootaneer.0*.dylib << Shlibs: << - %p/lib/libccp4mg-surface.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libccp4mg-utils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-analysis.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-AngleInfo.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-atomutils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-cabuild.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-compat.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-coord-extras.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-coord-utils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-coords.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-db-main.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-geometry.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-high-res.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-ideal.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-isosurface.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-ligand.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-map-heavy.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-map-utils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-mini-mol.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-sequence-view.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-shelx.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-skeleton.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-surface.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-tw.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-utils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-wrap-guile.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcoot-wrap-python.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) - %p/lib/libcootaneer.0.dylib 1.0.0 %n (>= 0.5-pre-1-1382-1) + %p/lib/libccp4mg-surface.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libccp4mg-utils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-analysis.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-AngleInfo.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-atomutils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-cabuild.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-compat.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-coord-extras.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-coord-utils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-coords.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-db-main.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-geometry.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-high-res.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-ideal.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-isosurface.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-ligand.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-map-heavy.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-map-utils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-mini-mol.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-sequence-view.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-shelx.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-skeleton.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-surface.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-tw.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-utils.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-wrap-guile.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcoot-wrap-python.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) + %p/lib/libcootaneer.0.dylib 1.0.0 %n (>= 0.5-pre-1-1391-1) << DocFiles: README AUTHORS NEWS COPYING ABOUT-NLS BUGS TODO << ------------------------------------------------------------------------- This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK & win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100&url=/ _______________________________________________ Fink-commits mailing list Fink-commits@lists.sourceforge.net http://news.gmane.org/gmane.os.apple.fink.cvs