Re: [Freesurfer] Looking for correct coordinates

2004-03-31 Thread Bruce Fischl
Hi Daniel, the coordinates of the inflated hemispheres are irrelevant - they have nothing to do with the underlying MR or where the brain is. If you need to do any MEG analysis you should use either the ?h.white or ?h.pial surfaces (or both). Bruce On Wed, 31 Mar 2004, Daniel Goldenholz wrot

Re: [Freesurfer] remote desktop turns blue?

2004-03-31 Thread Kevin Teich
> I don't know if anyone has had this problem before but when I remote desktop > into a PC running freesurfer (csurf), the brain image in tkmedit turns blue. > In addition, tksurfer doesn't load. When I relog on to the PC, I can reload > tkmedit and it works fine. This sounds like something rel

[Freesurfer] Looking for correct coordinates

2004-03-31 Thread Daniel Goldenholz
Hi freesurfer folks. I have a pair of inflated brains that I'd like to work with in matlab. I found a nice function called "read_surf.m" which works very well. But I noticed that the two hemispheres cannot be viewed at the same time, because their locations overlap! I pushed one to the left an

Re: [Freesurfer] remote desktop turns blue?

2004-03-31 Thread Bruce Fischl
Hi Thang, either the wm volume is not written correctly by tkmedit (check this be reloading it), mri_fill is not running properly, or mri_tessellate isn't. Check the logs and see which of the volumes reflect the changes you made. Bruce On Wed, 31 Mar 2004, Nguyen, Thang Q wrote: > Hello all,

[Freesurfer] remote desktop turns blue?

2004-03-31 Thread Nguyen, Thang Q
Hello all, I don’t know if anyone has had this problem before but when I remote desktop into a PC running freesurfer (csurf), the brain image in tkmedit turns blue.  In addition, tksurfer doesn’t load.  When I relog on to the PC, I can reload tkmedit and it works fine.     Here are some