Hello Everyone,
I have the following problem.
I have a section/patch of the Cortical Surface (Auditory area.) which I
would like to unfold/flatten.
The data is in matlab and I have it as vertex and faces of the cortical
surface.
I know how to write it to a ?h.pial.asc file format from matlab.
I have just fixed a bug in FreeSurfer that involves computing the area
of some surface structures. For those of you who care, this was a bug
that emerged after converting our surface meshes from quadralaterals
to triangles. This change was made a few years ago.
This change should have little eff
Actually, I don't know what the first two mean either. I don't think
you need them. Once you have the register.dat, then you're ready to go.
On Fri, 12 Nov 2004, Joongnam Yang wrote:
> Thanks Doug,
>
> So,
> "structural data registration"
> "functional data registration"
> "co-registration"
Thanks Doug,
So,
"structural data registration"
"functional data registration"
"co-registration"
have to be done separately? How do I do the first two?
The manual is pretty murky on that. Please enlighten me...
I am trying to do functional overlay using csurf and there are so many
hidden things w
Tell it to initialize the registration based on the header
information. To do this add --regheader to the command-line. Once the
register.dat exists, do not use --regheader unless you want to
overwrite your results.
On Fri, 12 Nov 2004, Joongnam Yang wrote:
> Thanks Doug,
>
> When I run
>
Thanks Doug,
When I run
tkregister2 --targ structuralimage --mov functionalimage --reg register.dat
I got the following error.
==
target volume X.img
movable volume XX.img
reg file register.dat
LoadVol1
$Id: tkregister2.c,v 1.22 2003/11/05 21:30:50 gr
I'll leave this for Doug.
Bruce
On Fri, 12 Nov 2004, Joongnam Yang wrote:
> Hi Bruce,
>
> I co-registered functional and structural images using SPM, the results of
> which looked normal.
> Then, I used spmmat2register to produce register.dat file.
> But "register.dat" contained only following tw
Use tkregister2 to create the register.dat. Run it with --help to get
more info. spmmat2register is obsolete.
doug
On Fri, 12 Nov 2004, Joongnam Yang wrote:
> Hi Bruce,
>
> I co-registered functional and structural images using SPM, the results of
> which looked normal.
> Then, I used spmmat
Hi Bruce,
I co-registered functional and structural images using SPM, the results of
which looked normal.
Then, I used spmmat2register to produce register.dat file.
But "register.dat" contained only following two lines.
subjectname
0.3000
It is supposed to have 8 lines.
Could you guess what we
