Re: [Freesurfer] transform back to origin coordination ?

2006-08-31 Thread Bruce Fischl
if your orig volume is in orig/001.mgz, then you can do: mri_convert -rl orig/001.mgz brainmask.mgz brainmask_transformed.mgz cheers, Bruce On Thu, 31 Aug 2006, tulu wrote: Dear Freesurfer experts, I use freesurfer and when I finish recon-all autorecon1, I would like to transform

Re: [Freesurfer] license file

2006-08-31 Thread Nick Schmansky
Frederick, Please follow this link to register: https://surfer.nmr.mgh.harvard.edu/registration.html I've fixed to wiki page to point to this one. I'm not sure why the 'http' link recently is failing, but in any case, you should be able to get a key now. Sorry for the trouble. Nick On Thu,

[Freesurfer] Hardware/Distro Gottchas?

2006-08-31 Thread Grant McAuley
Hello, We are about to install Free Surfer on a machine with Intel Core 2 Duo E6400, 2Gb DDR2 and Nvidia Geforce 7300GT video using an Ubuntu or Fedora Core distribution. Are there any 'gottchas' I should know about with this hardware or Linux distros (I will be using the latest drivers and