Hi Lena,
in general you only need to fix the skull stripping if it makes any of
the downstream processing less accurate. If the surfaces and aseg in the
region where the skullstrip leaves are accurate than you don't need to do
anything.
cheers,
Bruce
On Wed, 2 Sep 2009, Lena Palaniyappan
wrote:
Hi all
I am not grasping the concept of skull strip correction full, Im afraid. I
have attached a brainmask 128th slice sagittal of which shows some uneven
stripping (I couldn¹t attach the huge T1 image to overlay) - is this degree
of tissue separation acceptable?
Where does one set a limit? The example set in tutorial data shows some very
obvious stripping errors, but the data I have shows really minor stuff and
I am always unsure whether to continue auto recon 2 or correct them. Any
help?
Many thanks in advance
Cheers
LKP
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