If you put the gzipped and tarred subject dir on our FTP site I'll take a look
Cheers
Bruce
On May 20, 2012, at 12:41 AM, 李盟 wrote:
> Hi professor,
> The attachment is the subject after running the recon-all command. MR data
> were obtained on a 1.5T Philips Achieva Nova Dual MR scanner. th
Dear All,
>
> I processed a MR brain after temporal lobe resection. While brainmask.mgz,
> and brain.mgz include the temporal remnant (correctly), the calculated pial
> surface excludes it (see attached). How, and at what step can I edit the
> image so that the pial surface (red line) is inclusive
Looks like a topological defect sine there is not white surface their either,
is there?
On May 20, 2012, at 9:53 AM, octavian lie wrote:
>
>
> Dear All,
>
> I processed a MR brain after temporal lobe resection. While brainmask.mgz,
> and brain.mgz include the temporal remnant (correctly)
Hi Doug;
Thank you for your prompt reply. I have obtained Torig Tmov and Reg values
as below:
mri_info --vox2ras-tkr segmentedanatomic.nii
Torig=[-0.937500.00.0 120.0
0.00.01.2 -75.00016
0.0 -0.937500.0 120.0
0.00.0
Hi professor,
The subject has been uploaded. Can you give me some advice to troubleshoot the
outputs.
Thanks.
Meng Li
--
At 2012-05-20 21:27:28,"Bruce Fischl" wrote:
If you put the gzipped and tarred subject dir on our FTP site I'll take a look
Cheers
Bruce
On May 20, 2012, at 12:41
Hi Ruopeng,
yep, this fixes the problem and explains the user specificity.
Excellent work!
Many thanks,
Niels
__
Dr. Niels Focke
Klinische Neurophysiologie
UMG - Universitätsmedizin Göttingen
-Ursprüngliche Nach
