Hi all,
I posted this back in January, and got a direct email reply from
someone on the mailing list, who gave me a helpful tip, but it
doesn't seem to be working out quite right.
The problem: I have 3 .annot files per hemisphere, each based on the
?h.aparc.
Hi Zhennan
if you run recon-all on any dataset it will create an example for you.
The talairach.m3z maps the volume into the atlas coords. If it is
oriented incorrectly then that would explain your problem. You can also
use mri_info to see the direction cosines of the various volumes
cheers
Br
FYI
-- Forwarded message --
Date: Sat, 16 Feb 2013 10:07:12 +0100
From: Christian F. Beckmann
To: " Beckmann"
Subject: Job: Postdoctoral researcher ?Mathematical & Computational Modelling
for Multi-modal NeuroImaging data? (1,0 fte)
Dear colleagues,
I'm sorry to fill you
Dear Bruce,
Thank you very much for your suggestions. I have fixed the reslicing
problem and I am still trying to use mri_ca_label to relabel
sub-cortical structures in my data. Now the program output a new seg,
but the display of "tkmedit mysubj norm.mgz -segmentation new_seg.mgz
$FREESURFER_
Dear Anderson,
Thanks for the suggestions. I will give it a go.
All the best,
Shantanu
On Sat, February 16, 2013 10:14 am, Anderson M. Winkler wrote:
> Dear Shantanu,
>
> An implementation that runs in Matlab or Octave is available here:
> http://brainder.org/download/areal
>
> I was planning t
Dear Shantanu,
An implementation that runs in Matlab or Octave is available here:
http://brainder.org/download/areal
I was planning to write a compiled version that could be integrated more
easily in FS. However, just by the time as the paper was published, I moved
to another country and started
