Try recon-all -make all
> On Jan 2, 2016, at 4:37 PM, james pardon wrote:
>
> Dear Bruce,
>
> I'm following your advice and now have replaced wm.mgz. Could you please let
> me know what options I should add to recon-all so not to overwrite my wm.mgz
> and get things going from this point? ( I
Dear Bruce,
I'm following your advice and now have replaced wm.mgz. Could you please
let me know what options I should add to recon-all so not to overwrite my
wm.mgz and get things going from this point? ( I have already run the
recon-all so just need to re-run it with the replaced wm.mgz)
aseg.m
Hi John,
a few answers, maybe Jorge has more details when he get’s back from travel.
1. if you look at the wiki: Y = M(:,7:9), therefore these are the left and
right hippo-volumes. So the plot shows the total hippocampal volume.
2. I think you need to plot them individually. Probably you won’t
Hi Freesurfer experts,
I am working on a logitudinal data analysis using freesurfer pipeline. I followed all the steps like in WIKI and the analysis was great. Kindly I have the following questions:
1. In wiki "http://freesurfer.net/fswiki/LinearMixedEffectsModels"-- in the example mentioned the
Hello experts,
I reported the error related to '/scratch' a couple of weeks ago. We tested the
newest version of freesurfer 6.0. It looks likes that a lot of "if (-e
/scratch)" have been changed to "if (-dw /scratch)". However, there are still a
lot of binaries in the bin directory that match t
