Hi John,
In order to use bbregister you would first need to recon your data set as
the registration algorithm relies on surfaces. After that
Usage: bbregister --s --mov --reg --
Help: bbregister --help
Lilla
On Sun, 17 Jan 2016, John Anderson wrote:
Dear experts,
I wanted to
Dear Freesurfer,experts,
I am fairly new at DTI analysis. I have put together a script to
pre-process my DTI data (attached). I have been able to succesfully run
this for one of my datasets (T3) however, when I try to run the same script
for my other set (T4), I get many errors popping up (see
Dear experts,
I wanted to register T1 mprage image to the standard space MNI152. The output of FLIRT at dof 12 is not effective. How can I get better results using bbregister? What are the commands that I need to use ?
thanks for any help!
John
