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Dear experts,
Could you please help me in resolving following issue?
Thanks.
-- Forwarded message -
From: Martin Juneja
Date: Wed, Nov 28, 2018 at 2:23 PM
Subject: Overall maxima is high and still no significant cluster
To:
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It should be OK to use qt4 on Ubuntu 16, though I think qt5 would work as well.
Please test to see if you can freeview from where it was installed. Your
output below says that FREESURFER_HOME is /usr/local/freesurfer, so you should
have a
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*Thanks so much!*
*I installed the qt4 library but I received another error the* 'freeview:
command not found error'
*When I attempted it again, I received the following error:*
freeview.bin $argv
freeview.bin: error while loading shared libraries:
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Hello Maeve,
You can search for the package to install with apt-file, but you may need to
install that first, so try,
$ sudo apt install apt-file
$ sudo apt update
… now search for the package with that library name using apt-file
$ sudo apt-file
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I have now gotten this to run on 3 subjects. However I have 786 subjects and
need to find the bad apple. Is there a way I can do quality checks on each
subject’s difference map in fsaverage space that mris_preproc has made?
Basically I want to cycle
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*Hello,*
*I've been trying to resolve this issue but I haven't found a fix on the
mailing lists. I downloaded and installed the most recent version of
Freesurfer for Linux. I am running Ubuntu 16.04 LTS as guest on Virtualbox
5.2.22 on a windows 10
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The Perception & Brain Dynamics Laboratory (http://www.med.nyu.edu/helab/)
at Langone Medical Center, New York University is looking for a lab manager
to start in summer 2019. The Laboratory is within the Neuroscience
Institute at NYU Langone Health
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Hi Freesurfer experts,
After running the segmentation of hippocampus subfields, I'm wondering if I
can get the surface of the gray matter and white matter of hippocampus in
addition to subfields.
My goal is to divide the hippocampus cortex into
Yes, you can register other modalities to the T1 using bbregister. Then you can
use that registration to transform any volume from T1 space to the space of the
other modality. Check out the multimodal integration tutorials on the
freesurfer wiki.
On Dec 5, 2018 2:36 AM, Maedeh Khalilian
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Hi John,
Not sure if you still need this, but you can use our approach instead:
https://github.com/ThomasYeoLab/CBIG/tree/master/stable_projects/registration/Wu2017_RegistrationFusion
Regards,
Thomas
On Tue, Nov 20, 2018 at 2:15 AM john Anderson
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Hi!,
i am using recon-all -s -localGI to get the outer smoothed surface of
the pial files. This works, but when loading the original pial and the smoothed
one, some parts of the original pial stand out.
Is there any possibility / parameter to avoid
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