sure, you need to rerun mris_thickness with -max where N is the
threshold you want to use (making it big enough and nothing will get
thresholded)
On Fri, 5 Apr
2019, Gonzalo Rojas Costa wrote:
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Hi:
How can I get cortical thickness surface image
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Post-doctoral Position in Network Neuroscience at the University of Michigan
A post-doctoral position is available in network neuroscience at the University
of Michigan working with Chandra Sripada in Psychiatry, Liza Levina in
Statistics, and Scott
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I was using the RGB values listed here
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI/FreeSurferColorLUT
as a lookup table for values in annotations. However, I find the left and
right temporal lobes have different values. On the
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Hi:
How can I get cortical thickness surface image with values more than 5 mm?
Sincerely
Gonzalo Rojas Costa
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Northwestern University’s Mesulam Center for Cognitive Neurology and
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Prior experience with Alzheimer's disease is *not a requirement
probably easiest to use matlab. see
FREESURFER_HOME/matlab/read_annotation.m, which has an example
On 4/5/2019 11:29 AM, Gonzalo Rojas Costa wrote:
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>
> Hi:
>
>How can I get the different values of cortical thickness in the
> insula? Not the mean and SD.
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Hi:
How can I get the different values of cortical thickness in the
insula? Not the mean and SD...
Sincerely
Gonzalo Rojas Costa
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Hi Abby
if you upload an image that fails we will take a look. If I had to guess,
I would say it is because you have so much non-brain tissue (neck and even
shoulders). YOu could try cropping your rawavg.mgz with the freeview
tools->crop tool to elimate stuff below brainstem and see if that he
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Hi Freesurfer experts
I'm having a problem running an FSFAST group analysis. When I try to run
the second level GLM, I get the following error:
keri@buddha:~/audio_108_no_stc_tau1,5$ mri_glmfit --y
~/audio/all/audio.lh/tones/ces.nii.gz --wls
~/audio
