[Freesurfer] Mass-Univariate LME - help please!

2019-07-21 Thread tom parker
External Email - Use Caution Dear all, I am currently running a Mass-Univariate LME analysis in Freesurfer. I have some doubts about the last steps and I was wondering whether someone could help me figure them out and also check what I have done so far (sorry for the long email).

[Freesurfer] Using Freesurfer Commands for Neonate

2019-07-21 Thread Mahshid Fouladivanda
External Email - Use Caution Dear Experts, I have a neonate MRI Image which its parcellation file, surface files and the ribbon are not created by freesurfer. I have created an annotation file for it using "write_annotation". Now, for further processing I need to use freesur

Re: [Freesurfer] Failure of mri_robust_template in fmriprep

2019-07-21 Thread Bruce Fischl
Hi Blaise I can't even find an exit(-9) in the code. If you can track down and send us the inputs to mri_robust_template I can try to replicate it locally. Or wait for Martin to comment :) Bruce On Sun, 21 Jul 2019, Frederick, Blaise B. wrote: Hi,   I keep getting the same error ever