Hi everyone,
Just wanted to follow up with this in case anyone may have an idea of if this
can be done. Thanks!
--
Casey Hopkinson
Clinical Research Coordinator
Brain Genomics Laboratory
Division of Psychiatric Neuroimaging
Massachusetts General Hospital
149 13th Street, Charlestown, MA, 021
Yes, it does everything without regard to age or gender. The full processing
stream is pretty complicated, but it does segment various structures (white
matter and various GM structures)
On 8/22/2019 4:02 PM, Carissa Liana Grijalva wrote:
External Email - Use Caution
Hello FreeSurfer S
Yes, this is confusing. We can apply a transform to the MNI305 coords to get
approx Tal coords. If QDEC is showing you "Tal" coords, then this is what has
happened. I don't know what other papers reported. If they used the command
line stream (ie, no QDEC), then it is probably MNI305
On 8/22/20
You could create a class for each family and assign each pair to a class. But
this will not work unless you have multiple pairs per family for each family.
On 8/23/2019 9:01 AM, Hopkinson, Casey E wrote:
Hi everyone,
Just wanted to follow up with this in case anyone may have an idea of if this
Hi Doug, thanks for getting back to me! So since we have just one pair of
siblings per family, this way will not work?
--
Casey Hopkinson
Clinical Research Coordinator
Brain Genomics Laboratory
Division of Psychiatric Neuroimaging
Massachusetts General Hospital
149 13th Street, Charlestown, M
Hi Mona
if you upload your gzipped and tarred subject dir we will take a look (or
if it is somewhere accessible just point us to the network location and
give us access)
cheers
Bruce
On
Fri, 23 Aug 2019, falk.luesebr...@med.ovgu.de wrote:
External Email - Use Caution
Hi
External Email - Use Caution
Good morning Ruopeng, thank you for your continued assistance!
Unfortunately, I get the same error using the CentOS6 dev version. I tried the
CentOS7 dev version, however this led to a series of library errors, the
majority of which are unsolvable on
Hi Daniel - You can confirm if the orientation is different from your other
scans by running mri_info directly on the dicom. If these two subjects were
scanned in a completely different orientation than the rest of the subjects in
your study, e.g. coronal vs. axial, if does raise the question of
External Email - Use Caution
I've seen some previous posts about a measure of extra cerebral CSF coming in
the future. Is the measure now available, or is it still in the works? If it's
still in the works, can an ETA be provided?
Thanks,
Jared
__
You can use samseg in the development version. Keep in mind that it is somewhat
unstable. Make sure to give it an mgz and not a nifti or mgh file
On 8/23/2019 2:51 PM, Jared Nielsen wrote:
External Email - Use Caution
I've seen some previous posts about a measure of extra cerebral CSF
External Email - Use Caution
Hello Bruce,
thank you very much for your response.
I just uploaded a file. It is
called 109_Caroline_Chwiesko_8-23-2019.tar.gz. And I uploaded a file with
some example coordinates.
Thank you very much for taking the time and looking at it!
Best
Caro
External Email - Use Caution
Hi,
I have used:
mri_vol2vol --reg register.dof6.lta --mov fmcpr.nii.gz --fstarg --o
f-in-anat.mgh
mri_binarize --i mri/ThalamicNuclei.v10.T1.mgz --min 8112 --max 8114 --o
merged_ROIs.nii.gz
mri_segstats --seg merged_ROIs.nii.gz --id 1 --i f-in-anat
12 matches
Mail list logo