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Hello Adam,
It’s not clear to me that the vtk libs are the issue.
Please check that you setup your FREESURFER environment as listed on the
freesurfer help/wiki
pages,https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall
It looks like you would
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Hello,
thanks for your answer. Please see attached the screenshot.
I typed "$ which freeview.bin" --> the output:
"/usr/local/freesurfer/bin/freeview.bin"
I typed "$ ldd `which freeview.bin` | grep not" --> the output: 20 files
"libvtk...so.5.6 are
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Dear experts:
I am trying to run preproc-sess -s sess01 -fsd bold -stc up -surface fsaverage
lhrh -mni305 -fwhm 5 -per-run
But the outcome is ERROR: no run directories found.
What could be wrong?
If you need more information let me know!
Sincerely,
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Please, anyone able to answer these questions. Thanks a lot. Sent from my
Samsung Galaxy smartphone.
Original message From: miracle ozzoude
Date: 2019-10-21 10:24 (GMT-05:00) To: Douglas N Greve
Subject: subcortical volume-based
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Dear free surfer developers,
1.
I processed several items of data. And I have rh.w-g.pct file in my stats
folders.
How can I get process this file to get table reading file? I tried to use
asegstats2table and aparcstats2table but it didn’t work
Hi All,
We are looking into replacing our old Wacom segmentation tablet and the
two options that I have found so far are the
* Wacom Cintiq Pro 32
and
* Microsoft Surface Studio 2
Neither of these are linux compatible, which has created some issues
in the past.
Are there any groups out th
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Dear Freesurfer Developers,
I'm running a Qdec analysis in which I'm looking for correlations between
cortical thickness and a continuous CSF measurement.
I'm interested in a specific area in which a cluster of correlation pops
up, but doesn't survive
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Hello FreeSurfer Developers,
I'm doing the LME tutorial, and I have some questions .
1. Why don’t we need to put the healthy controls in the designed matrix X?
2. What’s the interpretation of the first row of the contrast matrix [1 0 0 0
0], does it
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I followed your given link and ran sudo -E fs_update
and came up with the following error just wanted to know is this error
related to SIP or is it a some other issue.
PILEPSY:subjects eoilepsyosirixadmin$ sudo -E fs_update
Build is freesurfer-Darwin