[Freesurfer] Multiple comparison using Monte Carlo

External Email - Use Caution Dear Freesurfer Expert: I have used the simulation code as show below: mri_glmfit-sim \ --glmdir lh.gender_age.glmdir \ --cache 4 neg \ --cwp 0.05\ --2spaces My question is how many iterations are done during this simulation? I didn’t

[Freesurfer] Plotting Longitudinal Data and Calculating Effect Sizes

External Email - Use Caution Hi FreeSurfer Experts, I used the longitudinal pipeline and analyzed my data using the univariate linear mixed effects models. I had a couple of questions: 1) The model outputted the F and p values. How do I calculate the effect size? 2) How do I